Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0512 and Psyr_0513 are separated by 226 nucleotides Psyr_0513 and Psyr_0514 overlap by 38 nucleotides Psyr_0514 and Psyr_0515 are separated by 137 nucleotides
Psyr_0512: Psyr_0512 - GCN5-related N-acetyltransferase, at 567,673 to 568,131
_0512
Psyr_0513: Psyr_0513 - amino acid ABC transporter substrate-binding protein, PAAT family, at 568,358 to 569,113
_0513
Psyr_0514: Psyr_0514 - Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK, at 569,076 to 571,274
_0514
Psyr_0515: Psyr_0515 - HI0933-like protein, at 571,412 to 572,590
_0515
Position (kb) 569
570
571
572 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.166 kb on + strand at 568.166 kb on + strand at 568.167 kb on - strand at 568.172 kb on + strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.275 kb on + strand at 568.275 kb on + strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.323 kb on - strand at 568.323 kb on - strand at 568.323 kb on - strand at 568.544 kb on + strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.634 kb on - strand, within Psyr_0513 at 568.634 kb on - strand, within Psyr_0513 at 568.661 kb on + strand, within Psyr_0513 at 568.662 kb on - strand, within Psyr_0513 at 568.662 kb on - strand, within Psyr_0513 at 568.739 kb on + strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.769 kb on + strand, within Psyr_0513 at 568.769 kb on + strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.836 kb on + strand, within Psyr_0513 at 568.837 kb on - strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.887 kb on + strand, within Psyr_0513 at 568.887 kb on + strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.895 kb on + strand, within Psyr_0513 at 568.944 kb on + strand, within Psyr_0513 at 568.976 kb on - strand, within Psyr_0513 at 569.045 kb on - strand at 569.063 kb on + strand at 569.064 kb on - strand at 569.064 kb on - strand at 569.064 kb on - strand at 569.369 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.399 kb on - strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.597 kb on - strand, within Psyr_0514 at 569.597 kb on - strand, within Psyr_0514 at 569.708 kb on + strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.803 kb on + strand, within Psyr_0514 at 569.876 kb on + strand, within Psyr_0514 at 570.352 kb on + strand, within Psyr_0514 at 570.352 kb on + strand, within Psyr_0514 at 570.352 kb on + strand, within Psyr_0514 at 570.352 kb on + strand, within Psyr_0514 at 570.353 kb on - strand, within Psyr_0514 at 570.369 kb on + strand, within Psyr_0514 at 570.369 kb on + strand, within Psyr_0514 at 570.370 kb on - strand, within Psyr_0514 at 570.478 kb on + strand, within Psyr_0514 at 570.478 kb on + strand, within Psyr_0514 at 570.478 kb on + strand, within Psyr_0514 at 570.479 kb on - strand, within Psyr_0514 at 570.484 kb on + strand, within Psyr_0514 at 570.529 kb on + strand, within Psyr_0514 at 570.529 kb on + strand, within Psyr_0514 at 570.529 kb on + strand, within Psyr_0514 at 570.529 kb on + strand, within Psyr_0514 at 570.530 kb on - strand, within Psyr_0514 at 570.530 kb on - strand, within Psyr_0514 at 570.852 kb on + strand, within Psyr_0514 at 570.853 kb on - strand, within Psyr_0514 at 570.853 kb on - strand, within Psyr_0514 at 570.853 kb on - strand, within Psyr_0514 at 570.853 kb on - strand, within Psyr_0514 at 570.889 kb on + strand, within Psyr_0514 at 570.889 kb on + strand, within Psyr_0514 at 570.928 kb on + strand, within Psyr_0514 at 570.928 kb on + strand, within Psyr_0514 at 571.211 kb on + strand at 571.211 kb on + strand at 571.213 kb on + strand at 571.213 kb on + strand at 571.213 kb on + strand at 571.213 kb on + strand at 571.214 kb on - strand at 571.214 kb on - strand at 571.214 kb on - strand at 571.214 kb on - strand at 571.250 kb on + strand at 571.250 kb on + strand at 571.250 kb on + strand at 571.250 kb on + strand at 571.250 kb on + strand at 571.251 kb on - strand at 571.251 kb on - strand at 571.251 kb on - strand at 571.251 kb on - strand at 571.251 kb on - strand at 571.251 kb on - strand at 571.323 kb on + strand at 571.323 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.324 kb on - strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.327 kb on + strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.328 kb on - strand at 571.348 kb on + strand at 571.348 kb on + strand at 571.348 kb on + strand at 571.348 kb on + strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.349 kb on - strand at 571.370 kb on + strand at 571.398 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.419 kb on + strand at 571.420 kb on - strand at 571.420 kb on - strand at 571.420 kb on - strand at 571.420 kb on - strand at 571.420 kb on - strand at 571.434 kb on + strand at 571.434 kb on + strand at 571.435 kb on - strand at 571.671 kb on + strand, within Psyr_0515 at 571.671 kb on + strand, within Psyr_0515 at 571.672 kb on - strand, within Psyr_0515 at 571.672 kb on - strand, within Psyr_0515 at 571.672 kb on - strand, within Psyr_0515
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methanol 5 vol% remove 568,076 + Psyr_0512 0.88 +0.9 568,076 + Psyr_0512 0.88 +0.0 568,076 + Psyr_0512 0.88 +1.0 568,076 + Psyr_0512 0.88 +0.0 568,076 + Psyr_0512 0.88 +1.3 568,077 - Psyr_0512 0.88 -1.2 568,077 - Psyr_0512 0.88 -0.9 568,077 - Psyr_0512 0.88 -0.6 568,166 + +0.6 568,166 + -0.1 568,167 - +1.2 568,172 + -0.5 568,252 - +0.9 568,252 - -0.7 568,252 - +0.7 568,275 + +1.1 568,275 + -1.6 568,276 - -0.5 568,276 - +1.1 568,276 - -0.1 568,322 + +0.4 568,322 + +0.5 568,322 + -0.0 568,323 - -2.3 568,323 - -1.9 568,323 - -1.3 568,544 + Psyr_0513 0.25 +0.4 568,545 - Psyr_0513 0.25 +0.4 568,545 - Psyr_0513 0.25 +1.0 568,545 - Psyr_0513 0.25 +0.4 568,634 - Psyr_0513 0.37 -2.8 568,634 - Psyr_0513 0.37 +0.1 568,661 + Psyr_0513 0.40 +1.4 568,662 - Psyr_0513 0.40 -3.2 568,662 - Psyr_0513 0.40 +1.6 568,739 + Psyr_0513 0.50 -1.1 568,740 - Psyr_0513 0.51 +0.1 568,740 - Psyr_0513 0.51 +1.2 568,740 - Psyr_0513 0.51 +0.4 568,740 - Psyr_0513 0.51 -0.2 568,740 - Psyr_0513 0.51 -1.9 568,769 + Psyr_0513 0.54 -1.9 568,769 + Psyr_0513 0.54 +0.5 568,770 - Psyr_0513 0.54 +0.3 568,770 - Psyr_0513 0.54 -0.9 568,770 - Psyr_0513 0.54 +0.3 568,836 + Psyr_0513 0.63 -0.8 568,837 - Psyr_0513 0.63 -1.3 568,883 + Psyr_0513 0.69 -0.1 568,883 + Psyr_0513 0.69 -0.9 568,883 + Psyr_0513 0.69 +1.2 568,883 + Psyr_0513 0.69 +0.2 568,883 + Psyr_0513 0.69 -0.9 568,884 - Psyr_0513 0.70 -1.8 568,884 - Psyr_0513 0.70 -0.1 568,884 - Psyr_0513 0.70 +1.1 568,884 - Psyr_0513 0.70 -1.1 568,884 - Psyr_0513 0.70 -1.3 568,884 - Psyr_0513 0.70 +0.7 568,884 - Psyr_0513 0.70 +0.2 568,884 - Psyr_0513 0.70 +0.6 568,884 - Psyr_0513 0.70 -0.8 568,884 - Psyr_0513 0.70 -0.1 568,884 - Psyr_0513 0.70 +1.2 568,887 + Psyr_0513 0.70 +0.8 568,887 + Psyr_0513 0.70 +0.6 568,888 - Psyr_0513 0.70 +0.3 568,888 - Psyr_0513 0.70 -2.4 568,888 - Psyr_0513 0.70 +0.2 568,895 + Psyr_0513 0.71 -0.3 568,944 + Psyr_0513 0.78 -1.1 568,976 - Psyr_0513 0.82 +0.9 569,045 - +0.9 569,063 + -0.5 569,064 - +0.6 569,064 - +0.9 569,064 - -1.7 569,369 + Psyr_0514 0.13 +0.3 569,398 + Psyr_0514 0.15 +1.1 569,398 + Psyr_0514 0.15 +0.7 569,398 + Psyr_0514 0.15 -0.2 569,399 - Psyr_0514 0.15 +0.7 569,596 + Psyr_0514 0.24 -0.1 569,596 + Psyr_0514 0.24 +1.2 569,596 + Psyr_0514 0.24 +0.7 569,596 + Psyr_0514 0.24 +1.3 569,596 + Psyr_0514 0.24 +0.2 569,597 - Psyr_0514 0.24 +0.8 569,597 - Psyr_0514 0.24 +0.6 569,708 + Psyr_0514 0.29 +1.1 569,709 - Psyr_0514 0.29 -0.2 569,709 - Psyr_0514 0.29 +1.3 569,709 - Psyr_0514 0.29 +0.7 569,803 + Psyr_0514 0.33 -0.1 569,876 + Psyr_0514 0.36 +0.7 570,352 + Psyr_0514 0.58 +0.6 570,352 + Psyr_0514 0.58 -1.7 570,352 + Psyr_0514 0.58 +0.4 570,352 + Psyr_0514 0.58 +1.0 570,353 - Psyr_0514 0.58 -0.5 570,369 + Psyr_0514 0.59 -1.4 570,369 + Psyr_0514 0.59 +0.4 570,370 - Psyr_0514 0.59 +1.2 570,478 + Psyr_0514 0.64 -1.0 570,478 + Psyr_0514 0.64 +0.6 570,478 + Psyr_0514 0.64 -1.3 570,479 - Psyr_0514 0.64 -0.4 570,484 + Psyr_0514 0.64 +0.7 570,529 + Psyr_0514 0.66 -0.8 570,529 + Psyr_0514 0.66 -1.7 570,529 + Psyr_0514 0.66 +1.0 570,529 + Psyr_0514 0.66 +1.2 570,530 - Psyr_0514 0.66 -0.8 570,530 - Psyr_0514 0.66 +1.6 570,852 + Psyr_0514 0.81 +0.8 570,853 - Psyr_0514 0.81 +0.3 570,853 - Psyr_0514 0.81 -0.5 570,853 - Psyr_0514 0.81 +2.1 570,853 - Psyr_0514 0.81 +1.1 570,889 + Psyr_0514 0.82 +1.1 570,889 + Psyr_0514 0.82 -1.0 570,928 + Psyr_0514 0.84 -1.4 570,928 + Psyr_0514 0.84 +2.9 571,211 + +0.9 571,211 + -0.7 571,213 + +1.4 571,213 + +1.1 571,213 + -0.7 571,213 + -0.3 571,214 - -1.7 571,214 - +2.5 571,214 - +1.2 571,214 - +0.5 571,250 + -1.9 571,250 + -1.1 571,250 + +0.2 571,250 + +1.9 571,250 + -0.8 571,251 - +0.1 571,251 - -0.4 571,251 - -0.1 571,251 - +0.6 571,251 - -0.0 571,251 - +0.0 571,323 + -2.0 571,323 - +0.1 571,324 - -0.1 571,324 - +0.9 571,324 - +0.0 571,324 - -2.4 571,327 + -0.1 571,327 + -4.2 571,327 + +2.7 571,327 + -0.1 571,327 + +1.3 571,327 + +1.5 571,327 + +0.3 571,327 + +2.5 571,327 + -0.7 571,327 + +1.2 571,328 - -2.3 571,328 - -1.9 571,328 - -0.5 571,328 - -1.3 571,328 - -1.9 571,328 - -2.5 571,328 - +0.1 571,328 - +0.2 571,328 - +0.4 571,328 - -0.2 571,328 - -0.7 571,328 - -1.3 571,328 - -1.7 571,328 - -0.6 571,348 + +0.5 571,348 + -1.7 571,348 + +2.3 571,348 + -1.1 571,349 - +0.5 571,349 - +2.5 571,349 - +0.0 571,349 - +2.2 571,349 - -0.5 571,349 - -1.4 571,349 - +0.6 571,370 + +0.5 571,398 + +0.4 571,419 + -3.0 571,419 + -0.7 571,419 + +0.9 571,419 + +1.2 571,419 + -0.7 571,419 + +0.5 571,419 + +1.3 571,419 + +0.2 571,419 + +0.0 571,419 + +2.2 571,420 - -1.9 571,420 - +0.9 571,420 - +0.1 571,420 - -0.0 571,420 - +0.7 571,434 + -1.0 571,434 + -0.0 571,435 - +0.4 571,671 + Psyr_0515 0.22 +0.5 571,671 + Psyr_0515 0.22 -0.7 571,672 - Psyr_0515 0.22 -0.8 571,672 - Psyr_0515 0.22 +0.6 571,672 - Psyr_0515 0.22 +0.8
Or see this region's nucleotide sequence