Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0458 and Psyr_0459 are separated by 311 nucleotides Psyr_0459 and Psyr_0460 are separated by 189 nucleotides
Psyr_0458: Psyr_0458 - Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal, at 494,944 to 496,833
_0458
Psyr_0459: Psyr_0459 - 5,10-methylenetetrahydrofolate reductase, at 497,145 to 497,990
_0459
Psyr_0460: Psyr_0460 - adenosylhomocysteinase, at 498,180 to 499,589
_0460
Position (kb) 497
498 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 496.258 kb on - strand, within Psyr_0458 at 496.683 kb on + strand at 496.684 kb on - strand at 496.837 kb on + strand at 496.837 kb on + strand at 496.837 kb on + strand at 496.858 kb on + strand at 496.858 kb on + strand at 496.858 kb on + strand at 496.858 kb on + strand at 496.897 kb on - strand at 497.042 kb on + strand at 497.042 kb on + strand at 497.043 kb on - strand at 497.043 kb on - strand at 497.043 kb on - strand at 497.044 kb on + strand at 497.044 kb on + strand at 497.044 kb on + strand at 497.045 kb on - strand at 497.045 kb on - strand at 497.045 kb on - strand at 497.061 kb on + strand at 497.089 kb on + strand at 497.089 kb on + strand at 497.090 kb on - strand at 497.090 kb on - strand at 497.090 kb on - strand at 497.207 kb on - strand at 497.207 kb on - strand at 497.306 kb on - strand, within Psyr_0459 at 497.322 kb on - strand, within Psyr_0459 at 497.380 kb on + strand, within Psyr_0459 at 497.380 kb on + strand, within Psyr_0459 at 497.380 kb on + strand, within Psyr_0459 at 497.380 kb on + strand, within Psyr_0459 at 497.380 kb on + strand, within Psyr_0459 at 497.381 kb on - strand, within Psyr_0459 at 497.381 kb on - strand, within Psyr_0459 at 497.381 kb on - strand, within Psyr_0459 at 497.381 kb on - strand, within Psyr_0459 at 497.381 kb on - strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.458 kb on + strand, within Psyr_0459 at 497.459 kb on - strand, within Psyr_0459 at 497.459 kb on - strand, within Psyr_0459 at 497.459 kb on - strand, within Psyr_0459 at 497.479 kb on + strand, within Psyr_0459 at 497.479 kb on + strand, within Psyr_0459 at 497.479 kb on + strand, within Psyr_0459 at 497.480 kb on - strand, within Psyr_0459 at 497.480 kb on - strand, within Psyr_0459 at 497.728 kb on + strand, within Psyr_0459 at 497.729 kb on - strand, within Psyr_0459 at 497.729 kb on - strand, within Psyr_0459 at 497.769 kb on + strand, within Psyr_0459 at 497.866 kb on + strand, within Psyr_0459 at 497.866 kb on + strand, within Psyr_0459 at 497.866 kb on + strand, within Psyr_0459 at 497.866 kb on + strand, within Psyr_0459 at 497.866 kb on + strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.867 kb on - strand, within Psyr_0459 at 497.893 kb on + strand, within Psyr_0459 at 497.893 kb on + strand, within Psyr_0459 at 497.893 kb on + strand, within Psyr_0459 at 497.893 kb on + strand, within Psyr_0459 at 497.893 kb on + strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.894 kb on - strand, within Psyr_0459 at 497.951 kb on + strand at 498.013 kb on + strand at 498.014 kb on - strand at 498.014 kb on - strand at 498.014 kb on - strand at 498.024 kb on + strand at 498.025 kb on - strand at 498.044 kb on + strand at 498.045 kb on - strand at 498.045 kb on - strand at 498.087 kb on + strand at 498.088 kb on - strand at 498.088 kb on - strand at 498.088 kb on - strand at 498.088 kb on - strand at 498.088 kb on - strand at 498.174 kb on + strand at 498.174 kb on + strand at 498.174 kb on + strand at 498.174 kb on + strand at 498.174 kb on + strand at 498.174 kb on + strand at 498.175 kb on - strand at 498.175 kb on - strand at 498.175 kb on - strand at 498.175 kb on - strand at 498.178 kb on + strand at 498.178 kb on + strand at 498.178 kb on + strand at 498.178 kb on + strand at 498.179 kb on - strand at 498.179 kb on - strand at 498.179 kb on - strand at 498.179 kb on - strand at 498.179 kb on - strand at 498.179 kb on - strand at 498.179 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methanol 5 vol% remove 496,258 - Psyr_0458 0.70 -0.4 496,683 + -1.0 496,684 - -1.2 496,837 + +0.1 496,837 + -0.6 496,837 + -0.3 496,858 + +0.4 496,858 + -0.1 496,858 + +0.2 496,858 + -0.0 496,897 - -0.0 497,042 + -3.2 497,042 + -2.3 497,043 - -2.8 497,043 - -0.1 497,043 - -0.1 497,044 + +0.0 497,044 + +0.6 497,044 + +0.1 497,045 - -0.5 497,045 - -1.0 497,045 - +2.5 497,061 + +0.9 497,089 + +0.4 497,089 + +0.4 497,090 - -0.6 497,090 - +0.9 497,090 - -1.1 497,207 - +1.0 497,207 - +0.4 497,306 - Psyr_0459 0.19 +0.6 497,322 - Psyr_0459 0.21 +0.4 497,380 + Psyr_0459 0.28 +0.4 497,380 + Psyr_0459 0.28 -0.6 497,380 + Psyr_0459 0.28 +0.1 497,380 + Psyr_0459 0.28 -2.0 497,380 + Psyr_0459 0.28 +0.7 497,381 - Psyr_0459 0.28 -0.3 497,381 - Psyr_0459 0.28 +0.9 497,381 - Psyr_0459 0.28 -2.5 497,381 - Psyr_0459 0.28 -2.5 497,381 - Psyr_0459 0.28 +2.9 497,458 + Psyr_0459 0.37 +0.1 497,458 + Psyr_0459 0.37 +1.1 497,458 + Psyr_0459 0.37 -0.5 497,458 + Psyr_0459 0.37 +2.2 497,458 + Psyr_0459 0.37 +0.7 497,458 + Psyr_0459 0.37 +0.4 497,458 + Psyr_0459 0.37 +0.7 497,458 + Psyr_0459 0.37 +0.9 497,458 + Psyr_0459 0.37 +1.0 497,459 - Psyr_0459 0.37 -0.2 497,459 - Psyr_0459 0.37 +3.5 497,459 - Psyr_0459 0.37 +1.4 497,479 + Psyr_0459 0.39 -0.2 497,479 + Psyr_0459 0.39 -0.1 497,479 + Psyr_0459 0.39 +2.3 497,480 - Psyr_0459 0.40 -3.9 497,480 - Psyr_0459 0.40 +0.3 497,728 + Psyr_0459 0.69 +0.4 497,729 - Psyr_0459 0.69 +0.8 497,729 - Psyr_0459 0.69 +0.4 497,769 + Psyr_0459 0.74 +0.9 497,866 + Psyr_0459 0.85 +0.6 497,866 + Psyr_0459 0.85 -1.0 497,866 + Psyr_0459 0.85 -0.1 497,866 + Psyr_0459 0.85 +0.9 497,866 + Psyr_0459 0.85 +1.3 497,867 - Psyr_0459 0.85 -0.3 497,867 - Psyr_0459 0.85 +0.7 497,867 - Psyr_0459 0.85 -1.1 497,867 - Psyr_0459 0.85 +1.4 497,867 - Psyr_0459 0.85 +0.5 497,867 - Psyr_0459 0.85 -0.3 497,893 + Psyr_0459 0.88 +1.2 497,893 + Psyr_0459 0.88 -1.4 497,893 + Psyr_0459 0.88 -0.6 497,893 + Psyr_0459 0.88 +0.4 497,893 + Psyr_0459 0.88 +0.6 497,894 - Psyr_0459 0.89 +0.9 497,894 - Psyr_0459 0.89 -2.1 497,894 - Psyr_0459 0.89 +4.3 497,894 - Psyr_0459 0.89 +0.3 497,894 - Psyr_0459 0.89 -0.2 497,894 - Psyr_0459 0.89 +0.1 497,894 - Psyr_0459 0.89 +0.4 497,951 + +0.1 498,013 + -1.5 498,014 - -0.5 498,014 - +0.6 498,014 - -0.4 498,024 + +1.9 498,025 - +0.1 498,044 + +0.1 498,045 - +0.3 498,045 - +0.2 498,087 + +0.8 498,088 - +0.8 498,088 - -0.6 498,088 - +0.7 498,088 - +1.0 498,088 - +1.5 498,174 + +0.4 498,174 + -0.6 498,174 + -0.5 498,174 + -1.5 498,174 + -0.1 498,174 + +0.8 498,175 - +0.2 498,175 - -2.2 498,175 - +1.4 498,175 - -0.2 498,178 + -0.5 498,178 + +1.9 498,178 + -1.2 498,178 + +1.3 498,179 - +0.6 498,179 - -0.3 498,179 - -0.2 498,179 - -0.3 498,179 - -0.5 498,179 - +0.7 498,179 - -0.3
Or see this region's nucleotide sequence