Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4561

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml
5,982,670	-				+0.6
5,982,684	-				-1.6
5,982,684	-				-1.0
5,982,693	-				-0.9
5,982,693	-				-2.0
5,982,790	-		BT4561	0.20	+1.1
5,982,819	-		BT4561	0.25	-1.4
5,982,911	-		BT4561	0.41	-1.6
5,982,911	-		BT4561	0.41	-1.4
5,983,004	-		BT4561	0.57	-2.5
5,983,004	-		BT4561	0.57	-3.8
5,983,050	-		BT4561	0.65	-1.6
5,983,163	-		BT4561	0.85	-3.4
5,983,351	-		BT4562	0.16	-1.3
5,983,389	-		BT4562	0.23	-1.6
5,983,582	-		BT4562	0.57	-1.8
5,983,707	-		BT4562	0.79	-2.0
5,984,199	-		BT4563	0.38	-0.3
5,984,204	-		BT4563	0.39	-1.8
5,984,211	-		BT4563	0.40	-1.0