Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2256

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml
2,827,655	+		BT2255	0.28	+0.8
2,827,656	-		BT2255	0.28	-0.8
2,827,675	+		BT2255	0.30	-0.3
2,827,689	+		BT2255	0.31	-1.7
2,827,689	+		BT2255	0.31	-0.5
2,827,690	-		BT2255	0.31	-1.4
2,827,816	+		BT2255	0.42	-0.3
2,827,975	+		BT2255	0.55	+1.2
2,827,982	-		BT2255	0.56	-1.4
2,828,003	+		BT2255	0.58	-1.5
2,828,004	-		BT2255	0.58	-1.2
2,828,005	+		BT2255	0.58	+0.9
2,828,012	+		BT2255	0.59	-0.8
2,828,012	+		BT2255	0.59	-1.6
2,828,012	+		BT2255	0.59	+0.0
2,828,054	+		BT2255	0.62	+0.7
2,828,054	+		BT2255	0.62	-2.2
2,828,188	-		BT2255	0.74	-1.2
2,828,200	+		BT2255	0.75	-1.6
2,828,217	-		BT2255	0.76	-2.0
2,828,217	-		BT2255	0.76	-1.1
2,828,227	+		BT2255	0.77	-1.1
2,828,318	-		BT2255	0.85	+0.2
2,828,318	-		BT2255	0.85	-1.5
2,828,421	-				-1.9
2,828,500	+				-0.3
2,828,504	+				-0.6
2,828,507	+				+0.7
2,828,507	+				-0.9
2,828,575	-				-1.6
2,828,594	+				-0.4
2,828,594	+				+1.8
2,828,605	+				-1.6
2,828,609	+				-0.5
2,828,610	-				-1.3
2,828,613	-				-0.7
2,828,613	-				-0.5
2,828,624	-				-2.4
2,828,624	-				-2.1
2,828,624	-				-0.8
2,828,627	-				-3.1
2,828,640	+				+1.1
2,830,318	-				-2.3
2,830,359	+				-2.3
2,830,385	+				-0.8
2,830,385	+				+0.9
2,830,386	-				-1.8
2,830,441	+				-1.0
2,830,507	+				-1.8
2,830,529	+				-0.6
2,830,539	+				-2.8
2,830,540	-				+0.5
2,830,544	-				-0.1
2,830,561	+				-2.2