Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1080

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml
1,365,623	+		BT1078	0.33	-1.7
1,365,639	+		BT1078	0.36	-2.1
1,365,640	-		BT1078	0.36	-2.8
1,365,640	-		BT1078	0.36	+0.5
1,365,661	-		BT1078	0.39	-2.3
1,365,686	+		BT1078	0.43	+0.2
1,365,686	+		BT1078	0.43	-1.7
1,365,704	+		BT1078	0.47	-2.3
1,365,704	+		BT1078	0.47	-2.2
1,365,704	+		BT1078	0.47	-1.5
1,365,705	-		BT1078	0.47	-1.3
1,365,787	+		BT1078	0.61	-0.5
1,365,788	-		BT1078	0.61	-2.1
1,365,938	+		BT1078	0.86	+0.1
1,365,964	+				+0.2
1,365,965	-				-1.5
1,365,975	+				-2.8
1,365,975	+				-2.0
1,365,976	-				-1.8
1,366,017	+				-0.1
1,366,200	+		BT1079	0.34	-1.3
1,366,571	-				+0.7
1,366,667	-		BT1080	0.23	-1.1
1,366,966	-		BT1080	0.90	-2.7
1,367,015	-				+0.2
1,367,151	-		BT1081	0.17	-0.0
1,367,188	-		BT1081	0.23	-2.0
1,367,286	-		BT1081	0.39	-2.3
1,367,474	-		BT1081	0.69	-0.9
1,367,496	-		BT1081	0.72	+1.3
1,367,765	-				+0.5
1,367,771	+				+0.4
1,367,774	+				-2.4
1,367,776	+				+0.5
1,367,874	+				-2.1
1,367,876	+				-0.9
1,367,879	-				-0.5
1,367,879	-				-1.3
1,367,965	-				+0.2
1,367,967	-				-1.9
1,367,998	-				-1.0
1,368,000	-				-1.8