Experiment: Disodium Glutarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03775 and BPHYT_RS03780 are separated by 150 nucleotides BPHYT_RS03780 and BPHYT_RS03785 are separated by 104 nucleotides BPHYT_RS03785 and BPHYT_RS03790 are separated by 44 nucleotides
BPHYT_RS03775: BPHYT_RS03775 - peroxidase, at 851,886 to 852,524
_RS03775
BPHYT_RS03780: BPHYT_RS03780 - acyl-CoA dehydrogenase, at 852,675 to 853,865
_RS03780
BPHYT_RS03785: BPHYT_RS03785 - IclR family transcriptional regulator, at 853,970 to 854,755
_RS03785
BPHYT_RS03790: BPHYT_RS03790 - diguanylate phosphodiesterase, at 854,800 to 855,633
_RS03790
Position (kb) 852
853
854 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2 at 851.707 kb on + strand at 851.707 kb on + strand at 851.708 kb on - strand at 851.708 kb on - strand at 851.743 kb on - strand at 851.770 kb on - strand at 851.770 kb on - strand at 851.774 kb on + strand at 851.774 kb on + strand at 851.775 kb on - strand at 851.798 kb on + strand at 851.799 kb on - strand at 851.799 kb on - strand at 851.799 kb on - strand at 851.822 kb on - strand at 851.873 kb on + strand at 851.873 kb on + strand at 851.874 kb on - strand at 851.893 kb on + strand at 851.894 kb on - strand at 851.972 kb on + strand, within BPHYT_RS03775 at 851.972 kb on + strand, within BPHYT_RS03775 at 851.972 kb on + strand, within BPHYT_RS03775 at 851.973 kb on - strand, within BPHYT_RS03775 at 851.973 kb on - strand, within BPHYT_RS03775 at 851.973 kb on - strand, within BPHYT_RS03775 at 852.138 kb on - strand, within BPHYT_RS03775 at 852.301 kb on - strand, within BPHYT_RS03775 at 852.475 kb on - strand at 852.477 kb on - strand at 852.477 kb on - strand at 852.523 kb on - strand at 852.532 kb on + strand at 852.737 kb on + strand at 852.745 kb on + strand at 852.746 kb on - strand at 852.746 kb on - strand at 852.746 kb on - strand at 853.039 kb on + strand, within BPHYT_RS03780 at 853.099 kb on + strand, within BPHYT_RS03780 at 853.100 kb on - strand, within BPHYT_RS03780 at 853.382 kb on - strand, within BPHYT_RS03780 at 853.495 kb on + strand, within BPHYT_RS03780 at 853.495 kb on + strand, within BPHYT_RS03780 at 853.528 kb on + strand, within BPHYT_RS03780 at 853.627 kb on + strand, within BPHYT_RS03780 at 853.628 kb on - strand, within BPHYT_RS03780 at 853.768 kb on + strand at 853.870 kb on + strand at 853.871 kb on - strand at 853.871 kb on - strand at 853.871 kb on - strand at 853.871 kb on - strand at 853.961 kb on + strand at 853.961 kb on + strand at 853.962 kb on - strand at 854.142 kb on - strand, within BPHYT_RS03785 at 854.142 kb on - strand, within BPHYT_RS03785 at 854.192 kb on + strand, within BPHYT_RS03785 at 854.192 kb on + strand, within BPHYT_RS03785 at 854.193 kb on - strand, within BPHYT_RS03785 at 854.193 kb on - strand, within BPHYT_RS03785 at 854.570 kb on + strand, within BPHYT_RS03785 at 854.820 kb on - strand at 854.820 kb on - strand at 854.862 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Disodium Glutarate (C) remove 851,707 + -1.6 851,707 + -3.2 851,708 - +0.1 851,708 - -0.6 851,743 - +1.1 851,770 - +0.2 851,770 - +0.1 851,774 + -0.3 851,774 + +0.0 851,775 - +0.4 851,798 + -0.7 851,799 - +0.3 851,799 - -1.6 851,799 - -0.0 851,822 - +0.9 851,873 + +0.5 851,873 + +0.4 851,874 - -0.8 851,893 + -0.6 851,894 - -0.3 851,972 + BPHYT_RS03775 0.13 +0.3 851,972 + BPHYT_RS03775 0.13 +1.9 851,972 + BPHYT_RS03775 0.13 -0.6 851,973 - BPHYT_RS03775 0.14 +0.0 851,973 - BPHYT_RS03775 0.14 -0.4 851,973 - BPHYT_RS03775 0.14 +0.4 852,138 - BPHYT_RS03775 0.39 -1.1 852,301 - BPHYT_RS03775 0.65 +0.5 852,475 - -0.1 852,477 - -0.1 852,477 - -0.1 852,523 - +0.6 852,532 + +0.7 852,737 + -3.8 852,745 + -2.0 852,746 - -5.0 852,746 - -6.9 852,746 - -2.4 853,039 + BPHYT_RS03780 0.31 -4.5 853,099 + BPHYT_RS03780 0.36 -3.5 853,100 - BPHYT_RS03780 0.36 -2.3 853,382 - BPHYT_RS03780 0.59 -4.3 853,495 + BPHYT_RS03780 0.69 -0.7 853,495 + BPHYT_RS03780 0.69 -3.1 853,528 + BPHYT_RS03780 0.72 -2.6 853,627 + BPHYT_RS03780 0.80 -4.2 853,628 - BPHYT_RS03780 0.80 -0.3 853,768 + -3.9 853,870 + -4.2 853,871 - -2.0 853,871 - -3.7 853,871 - -5.5 853,871 - -3.1 853,961 + -2.0 853,961 + -3.8 853,962 - -1.6 854,142 - BPHYT_RS03785 0.22 +0.3 854,142 - BPHYT_RS03785 0.22 +0.6 854,192 + BPHYT_RS03785 0.28 +0.8 854,192 + BPHYT_RS03785 0.28 -0.1 854,193 - BPHYT_RS03785 0.28 +0.8 854,193 - BPHYT_RS03785 0.28 -0.1 854,570 + BPHYT_RS03785 0.76 +0.9 854,820 - -0.0 854,820 - -1.0 854,862 - -0.4
Or see this region's nucleotide sequence