Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006494

Experiment: RCH2_defined_glucose_5mM with Cinnamic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Cinnamic 5 mM
2,879,697	+				+0.5
2,879,829	-		ABIE53_006493	0.17	+2.0
2,879,829	-		ABIE53_006493	0.17	+0.9
2,879,899	+		ABIE53_006493	0.25	+1.2
2,880,018	-		ABIE53_006493	0.39	+0.5
2,880,051	-		ABIE53_006493	0.43	+0.3
2,880,180	+		ABIE53_006493	0.57	+0.7
2,880,180	+		ABIE53_006493	0.57	+0.5
2,880,350	+		ABIE53_006493	0.77	-0.5
2,880,350	+		ABIE53_006493	0.77	+1.5
2,880,350	+		ABIE53_006493	0.77	-0.1
2,880,351	-		ABIE53_006493	0.77	+0.3
2,880,356	+		ABIE53_006493	0.77	-0.6
2,880,604	+				-1.8
2,880,605	-				-1.9
2,880,721	+		ABIE53_006494	0.17	-1.3
2,880,922	+		ABIE53_006494	0.38	-1.0
2,880,922	+		ABIE53_006494	0.38	-0.2
2,880,923	-		ABIE53_006494	0.38	+0.8
2,880,924	+		ABIE53_006494	0.38	-2.1
2,880,925	-		ABIE53_006494	0.38	+0.1
2,880,925	-		ABIE53_006494	0.38	+0.0
2,881,054	+		ABIE53_006494	0.52	-0.5
2,881,055	-		ABIE53_006494	0.52	-0.0
2,881,382	+		ABIE53_006494	0.86	+0.2
2,881,383	-		ABIE53_006494	0.86	-1.1
2,881,383	-		ABIE53_006494	0.86	+0.8
2,881,461	+				-0.5
2,881,462	-				+0.2
2,881,524	-				+0.3
2,881,599	+		ABIE53_006495	0.19	+1.3
2,881,599	+		ABIE53_006495	0.19	-0.2
2,881,605	+		ABIE53_006495	0.20	+0.4
2,881,632	+		ABIE53_006495	0.25	+0.1
2,881,632	+		ABIE53_006495	0.25	+1.5
2,881,633	-		ABIE53_006495	0.25	+0.4
2,881,917	+		ABIE53_006495	0.76	-1.9
2,881,917	+		ABIE53_006495	0.76	-1.0
2,881,929	+		ABIE53_006495	0.78	+0.5
2,881,929	+		ABIE53_006495	0.78	+0.1
2,882,012	-				-0.1
2,882,097	+				-1.7
2,882,097	+				+0.5
2,882,117	-				+0.5
2,882,163	+				-1.1
2,882,164	-				-0.1
2,882,170	+				+0.0
2,882,209	+				-0.3
2,882,210	-				-0.4
2,882,210	-				-0.3
2,882,210	-				-1.1
2,882,364	-		ABIE53_006496	0.10	-1.1