Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006366

Experiment: RCH2_defined_glucose_5mM with Cinnamic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Cinnamic 5 mM
2,732,575	+		ABIE53_006364	0.24	+3.1
2,732,575	+		ABIE53_006364	0.24	+1.3
2,732,576	-		ABIE53_006364	0.24	-1.2
2,732,576	-		ABIE53_006364	0.24	+0.0
2,732,619	-		ABIE53_006364	0.29	+0.6
2,732,739	+		ABIE53_006364	0.44	+2.0
2,732,739	+		ABIE53_006364	0.44	-0.0
2,732,739	+		ABIE53_006364	0.44	-0.4
2,732,739	+		ABIE53_006364	0.44	+0.2
2,732,740	-		ABIE53_006364	0.45	+0.9
2,732,770	+		ABIE53_006364	0.48	-2.1
2,732,850	+		ABIE53_006364	0.58	-2.1
2,732,851	-		ABIE53_006364	0.58	+2.1
2,732,873	-		ABIE53_006364	0.61	-1.4
2,733,212	+				+0.3
2,733,223	-				-2.4
2,733,248	-		ABIE53_006365	0.15	+0.1
2,733,334	+		ABIE53_006365	0.51	-0.9
2,733,335	-		ABIE53_006365	0.51	-1.0
2,733,476	+				+1.2
2,733,476	+				+0.4
2,733,476	+				-1.0
2,733,476	+				+1.4
2,733,478	+				+0.5
2,733,499	-				+0.3
2,733,708	+		ABIE53_006366	0.22	+0.6
2,733,708	+		ABIE53_006366	0.22	-0.1
2,733,709	-		ABIE53_006366	0.22	+2.0
2,733,709	-		ABIE53_006366	0.22	+2.3
2,733,709	-		ABIE53_006366	0.22	+0.6
2,733,714	+		ABIE53_006366	0.23	-1.3
2,733,714	+		ABIE53_006366	0.23	+0.4
2,733,714	+		ABIE53_006366	0.23	+0.6
2,733,715	-		ABIE53_006366	0.23	+0.6
2,733,715	-		ABIE53_006366	0.23	-0.0
2,733,786	-		ABIE53_006366	0.30	-1.1
2,733,892	-		ABIE53_006366	0.40	-0.8
2,733,967	+		ABIE53_006366	0.48	-0.4
2,734,111	+		ABIE53_006366	0.63	-1.1
2,734,186	+		ABIE53_006366	0.70	-1.8
2,734,187	-		ABIE53_006366	0.70	+0.7
2,734,187	-		ABIE53_006366	0.70	+0.6
2,734,339	+		ABIE53_006366	0.85	+0.6
2,734,339	+		ABIE53_006366	0.85	-0.0
2,734,339	+		ABIE53_006366	0.85	+0.6
2,734,340	-		ABIE53_006366	0.86	-1.1
2,734,414	-				+1.0
2,734,481	-				+0.6
2,734,542	+				-1.2
2,734,544	+				-0.2
2,734,544	+				-1.8
2,734,544	+				-0.2
2,734,544	+				+2.9
2,734,544	+				+0.2
2,734,545	-				+0.3
2,734,545	-				+1.1
2,734,605	+				-0.8
2,734,611	+				+2.0
2,734,611	+				-0.4
2,734,611	+				+2.6
2,734,612	-				+0.6
2,734,728	+		ABIE53_006367	0.17	-2.3
2,734,728	+		ABIE53_006367	0.17	-0.9
2,734,729	-		ABIE53_006367	0.17	+0.1
2,734,729	-		ABIE53_006367	0.17	-0.9
2,734,779	-		ABIE53_006367	0.22	+0.8
2,735,099	+		ABIE53_006367	0.57	+2.6
2,735,349	+		ABIE53_006367	0.85	-1.4
2,735,418	+				+0.1
2,735,418	+				-0.0
2,735,418	+				-2.0
2,735,418	+				-2.0
2,735,418	+				-0.0
2,735,418	+				-0.4
2,735,419	-				+0.4
2,735,419	-				-0.8