Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002639

Experiment: RCH2_defined_glucose_5mM with Cinnamic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Cinnamic 5 mM
2,970,581	-				+0.4
2,970,583	-				+0.0
2,970,617	+				-1.0
2,970,618	-				+0.3
2,970,726	-				-2.3
2,970,853	-		ABIE53_002638	0.23	-1.4
2,970,971	-		ABIE53_002638	0.40	-2.0
2,971,318	+				-0.8
2,971,318	+				-1.0
2,971,318	+				-0.4
2,971,393	+				-3.6
2,971,423	+				+0.0
2,971,423	+				-1.5
2,971,423	+				-2.5
2,971,423	+				-1.7
2,971,423	+				-3.4
2,971,424	-				+0.0
2,971,424	-				+0.6
2,971,424	-				+0.3
2,971,424	-				-0.8
2,971,424	-				-1.0
2,971,424	-				-1.0
2,971,424	-				+0.9
2,971,428	-				-0.7
2,971,719	+		ABIE53_002639	0.10	+0.9
2,971,977	+		ABIE53_002639	0.30	-0.6
2,971,978	-		ABIE53_002639	0.30	+0.6
2,971,978	-		ABIE53_002639	0.30	+0.6
2,972,445	+		ABIE53_002639	0.65	-0.5
2,972,446	-		ABIE53_002639	0.65	-0.9
2,972,521	+		ABIE53_002639	0.70	+0.3
2,972,522	-		ABIE53_002639	0.70	-1.0
2,972,676	+		ABIE53_002639	0.82	+0.0
2,972,689	-		ABIE53_002639	0.83	+1.0
2,972,689	-		ABIE53_002639	0.83	+1.6
2,972,916	+				-1.2
2,972,917	-				+0.1
2,972,917	-				+1.2
2,972,917	-				+1.9
2,972,925	+				-2.5
2,972,925	+				+0.0
2,972,925	+				-0.8
2,972,925	+				-0.1
2,972,926	-				+1.3
2,972,926	-				+0.9
2,972,926	-				-0.3
2,972,926	-				-3.0
2,972,926	-				-1.2
2,973,190	-		ABIE53_002640	0.35	-3.3
2,973,190	-		ABIE53_002640	0.35	-1.1
2,973,672	+				+1.1
2,973,672	+				-1.0
2,973,672	+				-0.9
2,973,673	-				-1.0
2,973,673	-				-1.0
2,973,673	-				-1.4
2,973,673	-				+0.2
2,973,832	+		ABIE53_002641	0.10	+2.2
2,973,832	+		ABIE53_002641	0.10	-0.7
2,973,832	+		ABIE53_002641	0.10	-2.0
2,973,832	+		ABIE53_002641	0.10	+0.4
2,973,873	+		ABIE53_002641	0.13	-1.6
2,973,874	-		ABIE53_002641	0.13	-0.3