Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003183

Experiment: RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM
3,601,415	-				-0.0
3,601,415	-				-0.5
3,601,415	-				+1.0
3,601,416	+				-0.8
3,601,416	+				-1.2
3,601,416	+				-0.5
3,601,416	+				-0.6
3,601,417	-				-1.1
3,601,417	-				-0.4
3,601,417	-				-0.7
3,601,537	-				-0.2
3,601,545	+				-0.1
3,601,563	+				-0.1
3,601,563	+				+0.4
3,601,563	+				+2.0
3,601,564	-				-1.0
3,601,564	-				-0.7
3,601,564	-				-0.3
3,601,564	-				-1.2
3,601,564	-				-1.1
3,601,599	+				-0.5
3,601,599	+				-0.3
3,601,599	+				-0.1
3,601,600	-				+1.7
3,601,600	-				+0.4
3,601,600	-				-0.0
3,601,600	-				-0.1
3,601,729	+				+1.0
3,601,729	+				+1.0
3,601,729	+				-1.7
3,601,729	+				+1.7
3,601,729	+				-0.1
3,601,729	+				-1.3
3,601,729	+				-1.8
3,601,729	+				+2.0
3,601,730	-				-0.0
3,601,730	-				-0.2
3,601,730	-				+1.2
3,601,730	-				-0.4
3,601,730	-				-1.3
3,601,868	+		ABIE53_003182	0.24	-0.6
3,601,868	+		ABIE53_003182	0.24	-0.3
3,601,881	+		ABIE53_003182	0.26	-0.8
3,601,882	-		ABIE53_003182	0.26	-0.6
3,601,987	+		ABIE53_003182	0.41	+1.0
3,601,987	+		ABIE53_003182	0.41	-0.0
3,601,988	-		ABIE53_003182	0.41	-0.6
3,602,035	-		ABIE53_003182	0.48	+0.1
3,602,035	-		ABIE53_003182	0.48	-0.3
3,602,035	-		ABIE53_003182	0.48	-0.5
3,602,170	-		ABIE53_003182	0.68	-0.1
3,602,170	-		ABIE53_003182	0.68	-0.7
3,602,170	-		ABIE53_003182	0.68	-0.2
3,602,231	+		ABIE53_003182	0.77	-2.1
3,602,231	+		ABIE53_003182	0.77	-0.4
3,602,231	+		ABIE53_003182	0.77	+0.1
3,602,358	+				-1.7
3,602,359	-				-1.5
3,602,518	+				+0.8
3,602,518	+				-0.3
3,602,518	+				-0.7
3,602,519	-				+0.3
3,602,519	-				+0.4
3,602,519	-				-1.5
3,602,530	+				+3.0
3,602,530	+				+2.0
3,602,602	+		ABIE53_003183	0.15	-0.3
3,602,767	+		ABIE53_003183	0.27	+0.4
3,602,767	+		ABIE53_003183	0.27	+0.2
3,602,767	+		ABIE53_003183	0.27	-2.7
3,602,767	+		ABIE53_003183	0.27	+1.0
3,602,767	+		ABIE53_003183	0.27	+0.3
3,602,767	+		ABIE53_003183	0.27	-0.1
3,602,768	-		ABIE53_003183	0.27	-0.4
3,602,768	-		ABIE53_003183	0.27	+1.0
3,602,768	-		ABIE53_003183	0.27	+1.2
3,602,768	-		ABIE53_003183	0.27	-0.3
3,602,768	-		ABIE53_003183	0.27	+2.0
3,602,827	+		ABIE53_003183	0.31	-0.8
3,602,827	+		ABIE53_003183	0.31	-0.9
3,602,827	+		ABIE53_003183	0.31	+0.9
3,602,827	+		ABIE53_003183	0.31	+0.6
3,602,827	+		ABIE53_003183	0.31	-0.1
3,602,828	-		ABIE53_003183	0.32	-0.2
3,602,828	-		ABIE53_003183	0.32	-0.0
3,602,828	-		ABIE53_003183	0.32	+0.1
3,603,147	+		ABIE53_003183	0.55	-0.7
3,603,147	+		ABIE53_003183	0.55	-0.0
3,603,148	-		ABIE53_003183	0.55	+2.7
3,603,148	-		ABIE53_003183	0.55	+0.9
3,603,199	+		ABIE53_003183	0.59	+0.1
3,603,199	+		ABIE53_003183	0.59	+1.0
3,603,199	+		ABIE53_003183	0.59	-0.0
3,603,199	+		ABIE53_003183	0.59	-0.0
3,603,199	+		ABIE53_003183	0.59	+0.1
3,603,200	-		ABIE53_003183	0.59	-0.6
3,603,200	-		ABIE53_003183	0.59	-0.3
3,603,200	-		ABIE53_003183	0.59	-1.6
3,603,311	-		ABIE53_003183	0.67	-1.0
3,603,311	-		ABIE53_003183	0.67	-0.0
3,603,382	+		ABIE53_003183	0.72	+0.6
3,603,478	+		ABIE53_003183	0.79	+0.3
3,603,478	+		ABIE53_003183	0.79	-0.3
3,603,478	+		ABIE53_003183	0.79	-0.6
3,603,478	+		ABIE53_003183	0.79	+1.4
3,603,478	+		ABIE53_003183	0.79	-0.6
3,603,478	+		ABIE53_003183	0.79	+0.4
3,603,479	-		ABIE53_003183	0.79	+0.4
3,603,479	-		ABIE53_003183	0.79	+0.6
3,603,479	-		ABIE53_003183	0.79	-0.2
3,603,479	-		ABIE53_003183	0.79	+1.4
3,603,479	-		ABIE53_003183	0.79	+1.2
3,603,479	-		ABIE53_003183	0.79	+1.0
3,603,479	-		ABIE53_003183	0.79	+0.0
3,603,479	-		ABIE53_003183	0.79	+0.9
3,603,479	-		ABIE53_003183	0.79	+2.5
3,603,480	+		ABIE53_003183	0.79	-0.8
3,603,595	+		ABIE53_003183	0.88	-1.4
3,603,595	+		ABIE53_003183	0.88	-1.7
3,603,596	-		ABIE53_003183	0.88	-1.2
3,603,607	+		ABIE53_003183	0.89	-0.3
3,603,607	+		ABIE53_003183	0.89	-0.6
3,603,607	+		ABIE53_003183	0.89	+1.0
3,603,607	+		ABIE53_003183	0.89	-0.3
3,603,608	-		ABIE53_003183	0.89	-0.7
3,603,608	-		ABIE53_003183	0.89	-0.3
3,603,608	-		ABIE53_003183	0.89	+1.2
3,603,608	-		ABIE53_003183	0.89	+0.4
3,603,608	-		ABIE53_003183	0.89	-2.6
3,603,608	-		ABIE53_003183	0.89	-0.1
3,603,608	-		ABIE53_003183	0.89	-1.4
3,603,608	-		ABIE53_003183	0.89	-0.3
3,603,639	+				+1.0
3,603,639	+				+0.4
3,603,639	+				-0.6
3,603,640	-				-0.3
3,603,683	+				+0.3
3,603,683	+				-1.2
3,603,760	+				-0.0
3,603,789	+				+0.0
3,603,789	+				+0.6
3,603,790	-				+0.1
3,603,790	-				+0.3
3,603,802	+				-1.5
3,603,802	+				-0.8
3,603,802	+				+0.9
3,603,802	+				+0.7
3,603,802	+				+2.0
3,603,802	+				-1.5
3,603,802	+				-0.8
3,603,803	-				-0.8
3,603,803	-				+1.1
3,603,803	-				+0.7
3,603,803	-				+0.6
3,603,803	-				+0.5
3,603,803	-				+2.0
3,603,803	-				+1.8
3,603,803	-				+2.0
3,603,803	-				-1.2
3,603,803	-				-2.5
3,603,803	-				-1.6
3,603,821	-				-0.4
3,603,913	+		ABIE53_003184	0.11	-1.6
3,603,913	+		ABIE53_003184	0.11	-0.8
3,603,913	+		ABIE53_003184	0.11	+1.0
3,603,913	+		ABIE53_003184	0.11	+0.7
3,603,913	+		ABIE53_003184	0.11	+0.4
3,603,913	+		ABIE53_003184	0.11	-1.1
3,603,913	+		ABIE53_003184	0.11	+1.9
3,603,913	+		ABIE53_003184	0.11	-1.1
3,603,914	-		ABIE53_003184	0.11	-0.2
3,603,914	-		ABIE53_003184	0.11	-0.4
3,603,914	-		ABIE53_003184	0.11	-0.2
3,603,914	-		ABIE53_003184	0.11	+0.8
3,603,914	-		ABIE53_003184	0.11	+1.0
3,604,147	+		ABIE53_003184	0.45	-0.3
3,604,147	+		ABIE53_003184	0.45	+3.6
3,604,147	+		ABIE53_003184	0.45	+1.2
3,604,147	+		ABIE53_003184	0.45	-0.9
3,604,147	+		ABIE53_003184	0.45	-0.9
3,604,147	+		ABIE53_003184	0.45	+1.4
3,604,147	+		ABIE53_003184	0.45	+1.3
3,604,148	-		ABIE53_003184	0.46	-0.3
3,604,148	-		ABIE53_003184	0.46	-1.5
3,604,148	-		ABIE53_003184	0.46	-1.1
3,604,148	-		ABIE53_003184	0.46	-0.6
3,604,148	-		ABIE53_003184	0.46	-2.0
3,604,148	-		ABIE53_003184	0.46	-0.5
3,604,189	+		ABIE53_003184	0.52	-0.6
3,604,189	+		ABIE53_003184	0.52	-0.9
3,604,189	+		ABIE53_003184	0.52	-0.4
3,604,189	+		ABIE53_003184	0.52	+0.1
3,604,190	-		ABIE53_003184	0.52	+0.2
3,604,479	+				-1.5
3,604,479	+				+0.4
3,604,479	+				-2.3
3,604,480	-				-0.1
3,604,572	+				-0.0
3,604,572	+				+0.1
3,604,572	+				+0.2
3,604,572	+				-0.3
3,604,572	+				-0.5
3,604,572	+				-1.8
3,604,572	+				-0.8
3,604,572	+				+1.4
3,604,572	+				-0.0
3,604,572	+				-1.2
3,604,573	-				+1.1
3,604,573	-				+2.0
3,604,573	-				-1.0
3,604,573	-				-0.0