Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3034

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
3,842,376	-				-3.8
3,842,376	-				-1.7
3,842,402	-				-0.8
3,842,472	-				-2.1
3,842,474	-				-6.3
3,842,594	+				-1.4
3,842,874	+		BT3035	0.27	-3.0
3,842,875	-		BT3035	0.27	-4.1
3,842,973	+		BT3035	0.33	-2.7
3,842,973	+		BT3035	0.33	-2.2
3,842,978	+		BT3035	0.33	-3.6
3,842,978	+		BT3035	0.33	-0.7
3,842,978	+		BT3035	0.33	-1.2
3,842,979	-		BT3035	0.33	-3.7
3,843,004	+		BT3035	0.35	-1.3
3,843,148	+		BT3035	0.44	-2.7
3,843,302	-		BT3035	0.54	-1.5