Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1527

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
1,880,417	+		BT1526	0.32	-1.9
1,880,418	-		BT1526	0.32	-1.2
1,880,517	-		BT1526	0.40	-2.6
1,880,635	-		BT1526	0.49	-0.1
1,880,714	+		BT1526	0.55	-0.8
1,880,730	-		BT1526	0.56	-1.5
1,880,815	-		BT1526	0.63	-1.9
1,880,909	+		BT1526	0.70	-0.6
1,880,916	-		BT1526	0.70	-0.8
1,881,025	+		BT1526	0.79	-1.6
1,881,026	-		BT1526	0.79	-3.0
1,881,161	+		BT1526	0.89	-1.3
1,881,241	-				-2.0
1,881,250	-				-0.2
1,881,282	-				-1.3
1,881,315	-				+2.0
1,881,342	+				-0.6
1,881,466	+				+0.7
1,881,466	+				+1.3
1,881,484	+				+0.6
1,881,489	+				+0.2
1,881,498	+				-1.6
1,881,563	+				-0.8
1,881,631	+				+0.2
1,881,842	+		BT1527	0.17	+1.7
1,881,872	+		BT1527	0.18	-0.1
1,881,934	+		BT1527	0.21	+1.0
1,882,211	+		BT1527	0.32	-0.1
1,882,244	+		BT1527	0.33	+1.2
1,882,297	+		BT1527	0.35	-0.0
1,882,399	+		BT1527	0.39	-0.0
1,882,404	+		BT1527	0.39	-1.6
1,882,597	+		BT1527	0.47	+0.5
1,882,637	-		BT1527	0.48	-1.6
1,882,832	-		BT1527	0.56	-0.8
1,882,958	+		BT1527	0.61	-0.0
1,882,958	+		BT1527	0.61	+0.9
1,882,959	-		BT1527	0.61	-1.2
1,883,002	-		BT1527	0.63	-0.3
1,883,020	+		BT1527	0.63	-1.0
1,883,041	+		BT1527	0.64	+1.2
1,883,187	-		BT1527	0.70	+1.3
1,883,243	+		BT1527	0.72	-0.6
1,883,258	+		BT1527	0.73	-0.2
1,883,342	-		BT1527	0.76	-1.9
1,883,412	+		BT1527	0.79	-0.6
1,883,413	-		BT1527	0.79	+1.3
1,883,413	-		BT1527	0.79	+0.0
1,883,446	-		BT1527	0.80	-0.9
1,883,632	-		BT1527	0.87	+1.8
1,883,647	+		BT1527	0.88	-1.7
1,883,672	+		BT1527	0.89	-1.6
1,883,674	+		BT1527	0.89	-0.6
1,883,718	-				-0.4
1,883,720	-				-1.4
1,883,823	+				+1.1
1,883,829	+				-1.7
1,883,830	-				-0.7
1,883,834	-				+0.2
1,883,834	-				-2.1
1,883,881	-				+0.5
1,883,881	-				-0.8
1,883,884	+				+0.8
1,883,917	-				-0.3
1,883,942	+				-0.0
1,883,943	-				-0.4
1,883,962	+				+0.2
1,883,963	-				-1.4
1,883,963	-				+0.2
1,883,964	+				+1.4
1,884,030	-				-1.1
1,884,030	-				+1.8
1,884,031	+				+1.8
1,884,105	+				-0.1
1,884,345	-		BT1528	0.22	+1.6
1,884,414	-		BT1528	0.27	-0.3
1,884,458	-		BT1528	0.30	-0.3
1,884,586	+		BT1528	0.40	-0.6
1,884,624	-		BT1528	0.43	-0.6
1,884,794	-		BT1528	0.56	-0.8
1,884,800	-		BT1528	0.57	+0.8
1,884,806	-		BT1528	0.57	-0.2
1,884,881	+		BT1528	0.63	+0.1