Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1361

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
1,687,348	-				-1.2
1,687,443	+				-0.7
1,687,457	+				-0.2
1,688,238	-				-1.9
1,688,386	-				-1.3
1,688,386	-				-1.8
1,688,388	-				-2.7
1,688,389	+				-0.9
1,688,501	-		BT1361	0.16	-1.5
1,688,627	-		BT1361	0.23	-0.8
1,688,690	-		BT1361	0.27	-1.7
1,688,889	-		BT1361	0.39	-1.3
1,688,889	-		BT1361	0.39	-0.9
1,688,889	-		BT1361	0.39	-3.4
1,688,889	-		BT1361	0.39	-2.5
1,689,415	-		BT1361	0.71	-0.3
1,689,422	-		BT1361	0.71	-2.4
1,689,429	-		BT1361	0.72	+0.4
1,689,631	-		BT1361	0.84	-1.8
1,689,724	-		BT1361	0.89	-1.9
1,689,724	-		BT1361	0.89	-0.7