Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11760

Experiment: Sucrose (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with MOPS
2,607,991	+		PFLU_RS11750	0.68	-0.1
2,607,992	-		PFLU_RS11750	0.68	+0.7
2,607,992	-		PFLU_RS11750	0.68	-1.5
2,607,992	-		PFLU_RS11750	0.68	+0.3
2,608,054	+		PFLU_RS11750	0.75	-0.4
2,608,054	+		PFLU_RS11750	0.75	-1.3
2,608,054	+		PFLU_RS11750	0.75	-0.5
2,608,054	+		PFLU_RS11750	0.75	-0.3
2,608,054	+		PFLU_RS11750	0.75	+0.2
2,608,054	+		PFLU_RS11750	0.75	-0.3
2,608,055	-		PFLU_RS11750	0.75	+0.2
2,608,055	-		PFLU_RS11750	0.75	-0.9
2,608,055	-		PFLU_RS11750	0.75	-0.3
2,608,149	-		PFLU_RS11750	0.86	-0.6
2,608,219	+				-0.7
2,608,219	+				+1.8
2,608,220	-				-0.5
2,608,220	-				-0.3
2,608,274	+				-1.3
2,608,274	+				+0.3
2,608,274	+				+0.8
2,608,274	+				+0.7
2,608,274	+				+0.1
2,608,274	+				+0.7
2,608,274	+				+0.4
2,608,274	+				+0.4
2,608,274	+				+2.3
2,608,274	+				+0.0
2,608,275	-				+0.2
2,608,275	-				-0.2
2,608,275	-				-2.0
2,608,373	-				+0.4
2,608,391	-				+1.3
2,608,391	-				+0.7
2,608,509	+		PFLU_RS11755	0.12	-0.5
2,608,516	+		PFLU_RS11755	0.13	-1.1
2,608,517	-		PFLU_RS11755	0.13	-1.7
2,608,522	+		PFLU_RS11755	0.14	-1.7
2,608,525	+		PFLU_RS11755	0.15	-3.0
2,608,525	+		PFLU_RS11755	0.15	-1.0
2,608,525	+		PFLU_RS11755	0.15	+0.3
2,608,525	+		PFLU_RS11755	0.15	+0.7
2,608,526	-		PFLU_RS11755	0.15	+0.6
2,608,526	-		PFLU_RS11755	0.15	+2.3
2,608,526	-		PFLU_RS11755	0.15	+0.1
2,608,526	-		PFLU_RS11755	0.15	-1.1
2,608,526	-		PFLU_RS11755	0.15	-0.8
2,608,531	+		PFLU_RS11755	0.16	-0.1
2,608,532	-		PFLU_RS11755	0.16	-0.6
2,608,532	-		PFLU_RS11755	0.16	+1.2
2,608,582	+		PFLU_RS11755	0.26	+0.6
2,608,582	+		PFLU_RS11755	0.26	-0.4
2,608,582	+		PFLU_RS11755	0.26	+0.4
2,608,582	+		PFLU_RS11755	0.26	-1.1
2,608,582	+		PFLU_RS11755	0.26	+1.1
2,608,582	+		PFLU_RS11755	0.26	-0.4
2,608,583	-		PFLU_RS11755	0.26	+1.4
2,608,583	-		PFLU_RS11755	0.26	+0.2
2,608,583	-		PFLU_RS11755	0.26	-0.3
2,608,657	+		PFLU_RS11755	0.41	+0.3
2,608,658	-		PFLU_RS11755	0.41	-0.1
2,608,658	-		PFLU_RS11755	0.41	-0.2
2,608,822	+		PFLU_RS11755	0.73	-1.3
2,608,822	+		PFLU_RS11755	0.73	-2.0
2,608,822	+		PFLU_RS11755	0.73	-0.3
2,608,822	+		PFLU_RS11755	0.73	-1.9
2,608,822	+		PFLU_RS11755	0.73	-0.2
2,608,822	+		PFLU_RS11755	0.73	-1.1
2,608,823	-		PFLU_RS11755	0.74	-0.5
2,608,823	-		PFLU_RS11755	0.74	+1.3
2,608,823	-		PFLU_RS11755	0.74	+0.3
2,608,823	-		PFLU_RS11755	0.74	-2.2
2,608,823	-		PFLU_RS11755	0.74	-1.7
2,608,927	+				-0.8
2,608,928	-				+1.3
2,608,928	-				+0.3
2,608,936	-				-0.0
2,608,954	+				-1.3
2,608,954	+				+0.4
2,608,955	-				-0.7
2,609,239	-		PFLU_RS11760	0.32	-0.6
2,609,270	-		PFLU_RS11760	0.36	-0.1
2,609,685	+		PFLU_RS11760	0.79	-0.7
2,609,685	+		PFLU_RS11760	0.79	+0.1
2,609,775	+		PFLU_RS11760	0.89	-1.9
2,609,775	+		PFLU_RS11760	0.89	-1.0
2,609,776	-		PFLU_RS11760	0.89	-0.2
2,609,776	-		PFLU_RS11760	0.89	+0.8
2,610,001	+				-0.7
2,610,001	+				+0.0
2,610,001	+				+0.8
2,610,066	+				-0.2
2,610,066	+				+0.3
2,610,149	+		PFLU_RS11765	0.15	-0.3
2,610,150	-		PFLU_RS11765	0.16	-1.3
2,610,150	-		PFLU_RS11765	0.16	-0.2
2,610,150	-		PFLU_RS11765	0.16	-0.9
2,610,171	+		PFLU_RS11765	0.19	+0.4
2,610,171	+		PFLU_RS11765	0.19	-1.5
2,610,171	+		PFLU_RS11765	0.19	-3.0
2,610,172	-		PFLU_RS11765	0.19	-0.3
2,610,184	+		PFLU_RS11765	0.21	+1.5
2,610,184	+		PFLU_RS11765	0.21	-1.9
2,610,184	+		PFLU_RS11765	0.21	-1.2
2,610,184	+		PFLU_RS11765	0.21	+0.2
2,610,184	+		PFLU_RS11765	0.21	-0.4
2,610,185	-		PFLU_RS11765	0.21	-0.4
2,610,185	-		PFLU_RS11765	0.21	+0.3
2,610,185	-		PFLU_RS11765	0.21	-2.6
2,610,190	+		PFLU_RS11765	0.22	+0.4
2,610,190	+		PFLU_RS11765	0.22	+1.0
2,610,190	+		PFLU_RS11765	0.22	-0.4
2,610,190	+		PFLU_RS11765	0.22	+0.6
2,610,190	+		PFLU_RS11765	0.22	-0.1
2,610,191	-		PFLU_RS11765	0.22	-0.7
2,610,191	-		PFLU_RS11765	0.22	-1.2
2,610,201	+		PFLU_RS11765	0.24	-1.5
2,610,202	-		PFLU_RS11765	0.24	+1.4
2,610,221	+		PFLU_RS11765	0.27	+0.3
2,610,221	+		PFLU_RS11765	0.27	+1.3
2,610,222	-		PFLU_RS11765	0.27	+0.4
2,610,232	-		PFLU_RS11765	0.29	+0.4
2,610,235	+		PFLU_RS11765	0.29	+1.0
2,610,235	+		PFLU_RS11765	0.29	+1.0
2,610,235	+		PFLU_RS11765	0.29	-0.3
2,610,235	+		PFLU_RS11765	0.29	-0.6
2,610,235	+		PFLU_RS11765	0.29	-0.3
2,610,236	-		PFLU_RS11765	0.29	+0.3
2,610,236	-		PFLU_RS11765	0.29	+1.7
2,610,247	+		PFLU_RS11765	0.31	+1.0
2,610,247	+		PFLU_RS11765	0.31	+0.0
2,610,247	+		PFLU_RS11765	0.31	-0.0
2,610,247	+		PFLU_RS11765	0.31	+0.0
2,610,247	+		PFLU_RS11765	0.31	-0.6
2,610,247	+		PFLU_RS11765	0.31	+0.4
2,610,247	+		PFLU_RS11765	0.31	-0.1
2,610,247	+		PFLU_RS11765	0.31	-0.9
2,610,247	+		PFLU_RS11765	0.31	-0.9
2,610,247	+		PFLU_RS11765	0.31	-0.3
2,610,247	+		PFLU_RS11765	0.31	-0.7
2,610,248	-		PFLU_RS11765	0.31	+0.3
2,610,248	-		PFLU_RS11765	0.31	+0.1
2,610,248	-		PFLU_RS11765	0.31	+0.9
2,610,248	-		PFLU_RS11765	0.31	-0.7
2,610,248	-		PFLU_RS11765	0.31	-2.3
2,610,248	-		PFLU_RS11765	0.31	+0.8
2,610,248	-		PFLU_RS11765	0.31	-0.4
2,610,248	-		PFLU_RS11765	0.31	+2.0
2,610,248	-		PFLU_RS11765	0.31	+2.3
2,610,258	+		PFLU_RS11765	0.33	+0.3
2,610,258	+		PFLU_RS11765	0.33	+0.1
2,610,259	-		PFLU_RS11765	0.33	+0.1
2,610,287	+		PFLU_RS11765	0.37	+0.3
2,610,287	+		PFLU_RS11765	0.37	+0.4
2,610,288	-		PFLU_RS11765	0.37	+0.3
2,610,288	-		PFLU_RS11765	0.37	+0.8
2,610,313	+		PFLU_RS11765	0.41	+0.5
2,610,314	-		PFLU_RS11765	0.42	-0.1
2,610,538	+		PFLU_RS11765	0.77	-1.3
2,610,538	+		PFLU_RS11765	0.77	-0.1
2,610,538	+		PFLU_RS11765	0.77	+0.5
2,610,539	-		PFLU_RS11765	0.77	+0.5
2,610,539	-		PFLU_RS11765	0.77	-0.2
2,610,539	-		PFLU_RS11765	0.77	+0.1
2,610,539	-		PFLU_RS11765	0.77	-0.2
2,610,539	-		PFLU_RS11765	0.77	-1.0
2,610,685	+				+0.9
2,610,685	+				-0.4
2,610,685	+				-1.2
2,610,685	+				+1.5
2,610,685	+				+1.3
2,610,685	+				+0.7
2,610,685	+				+1.3
2,610,685	+				-1.0
2,610,685	+				+0.6
2,610,685	+				-0.9
2,610,686	-				-0.0
2,610,686	-				-1.6
2,610,686	-				+0.7
2,610,686	-				+0.2
2,610,688	+				+0.1
2,610,689	-				+0.7
2,610,694	+				-1.0
2,610,694	+				+0.3
2,610,695	-				-1.5
2,610,695	-				+0.3
2,610,768	+		PFLU_RS11770	0.13	-1.1
2,610,768	+		PFLU_RS11770	0.13	+0.1
2,610,771	+		PFLU_RS11770	0.14	+0.7