Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005434

Experiment: RCH2_defined_glucose_5mM with Chlorogenic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Chlorogenic 1 mM
1,710,527	+				-0.7
1,710,528	-				-0.9
1,710,553	+				-1.6
1,710,645	+				+0.1
1,710,695	+				-0.3
1,710,824	-		ABIE53_005433	0.20	-0.5
1,711,008	-		ABIE53_005433	0.44	+2.1
1,711,367	+				-1.4
1,711,461	+				-0.4
1,711,462	-				-0.9
1,711,462	-				+0.4
1,711,462	-				+0.1
1,711,462	-				+0.0
1,711,462	-				+0.5
1,711,462	-				-1.3
1,711,485	+				+0.5
1,711,642	+		ABIE53_005434	0.13	+0.4
1,711,643	-		ABIE53_005434	0.13	-0.0
1,712,254	+		ABIE53_005434	0.79	+0.0
1,712,344	-		ABIE53_005434	0.89	+0.7
1,712,344	-		ABIE53_005434	0.89	+0.2
1,712,404	+				+1.2
1,713,018	-		ABIE53_005435	0.65	+0.1
1,713,290	-				-0.3
1,713,409	-				+1.1
1,713,422	-				-0.3
1,713,422	-				-0.9