Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003247

Experiment: RCH2_defined_glucose_5mM with Chlorogenic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Chlorogenic 1 mM
3,664,224	+		ABIE53_003246	0.20	-1.9
3,664,224	+		ABIE53_003246	0.20	+0.5
3,664,224	+		ABIE53_003246	0.20	-0.4
3,664,224	+		ABIE53_003246	0.20	-2.4
3,664,224	+		ABIE53_003246	0.20	-0.9
3,664,224	+		ABIE53_003246	0.20	+0.4
3,664,224	+		ABIE53_003246	0.20	-0.1
3,664,242	+		ABIE53_003246	0.21	-1.1
3,664,242	+		ABIE53_003246	0.21	-1.6
3,664,242	+		ABIE53_003246	0.21	-0.2
3,664,593	+		ABIE53_003246	0.52	-1.7
3,664,593	+		ABIE53_003246	0.52	-1.1
3,664,593	+		ABIE53_003246	0.52	-1.0
3,664,677	+		ABIE53_003246	0.59	-1.2
3,664,677	+		ABIE53_003246	0.59	+0.3
3,664,677	+		ABIE53_003246	0.59	-0.9
3,664,677	+		ABIE53_003246	0.59	+0.5
3,664,677	+		ABIE53_003246	0.59	-0.7
3,664,677	+		ABIE53_003246	0.59	+1.7
3,664,677	+		ABIE53_003246	0.59	+0.3
3,664,677	+		ABIE53_003246	0.59	-0.0
3,664,677	+		ABIE53_003246	0.59	+1.9
3,664,980	+		ABIE53_003246	0.86	+3.3
3,664,980	+		ABIE53_003246	0.86	-0.4
3,664,980	+		ABIE53_003246	0.86	-0.5
3,664,980	+		ABIE53_003246	0.86	-1.5
3,664,980	+		ABIE53_003246	0.86	-0.5
3,664,980	+		ABIE53_003246	0.86	-0.6
3,664,980	+		ABIE53_003246	0.86	-0.7
3,664,980	+		ABIE53_003246	0.86	-1.0
3,664,980	+		ABIE53_003246	0.86	+0.3
3,664,980	+		ABIE53_003246	0.86	+0.3
3,664,980	+		ABIE53_003246	0.86	-0.8
3,664,980	+		ABIE53_003246	0.86	-1.4
3,664,980	+		ABIE53_003246	0.86	-1.6
3,665,070	+				-0.7
3,666,122	+				+0.1
3,666,123	-				+0.9
3,666,123	-				+0.9
3,666,202	+				+0.6
3,666,202	+				+0.2
3,666,202	+				+0.3
3,666,202	+				-1.3
3,666,202	+				-0.1
3,666,203	-				-0.1
3,666,203	-				-1.4
3,666,203	-				+1.3
3,666,203	-				-0.4
3,666,203	-				+0.1
3,666,271	-				+0.4
3,666,271	-				-1.5
3,666,300	+				+0.1
3,666,300	+				+0.9
3,666,300	+				-0.1
3,666,300	+				-0.9
3,666,301	-				-0.7
3,666,301	-				+0.3
3,666,301	-				+0.5
3,666,340	+				-0.8
3,666,340	+				-1.0
3,666,340	+				-1.1
3,666,340	+				+0.4
3,666,340	+				-0.7
3,666,340	+				+0.9
3,666,341	-				-0.6
3,666,341	-				-0.1
3,666,341	-				+1.6
3,666,341	-				+0.8
3,666,487	+		ABIE53_003249	0.18	+1.9
3,666,487	+		ABIE53_003249	0.18	-0.2
3,666,487	+		ABIE53_003249	0.18	-0.1
3,666,487	+		ABIE53_003249	0.18	-0.3
3,666,487	+		ABIE53_003249	0.18	-0.5
3,666,487	+		ABIE53_003249	0.18	+1.4
3,666,487	+		ABIE53_003249	0.18	+1.9
3,666,487	+		ABIE53_003249	0.18	-0.6
3,666,487	+		ABIE53_003249	0.18	+0.6
3,666,487	+		ABIE53_003249	0.18	+0.1
3,666,487	+		ABIE53_003249	0.18	+1.5
3,666,488	-		ABIE53_003249	0.18	-0.5
3,666,488	-		ABIE53_003249	0.18	-0.2
3,666,488	-		ABIE53_003249	0.18	+0.5
3,666,488	-		ABIE53_003249	0.18	+0.4
3,666,488	-		ABIE53_003249	0.18	+0.4
3,666,488	-		ABIE53_003249	0.18	-1.6
3,666,488	-		ABIE53_003249	0.18	+0.7
3,666,488	-		ABIE53_003249	0.18	+1.3
3,666,488	-		ABIE53_003249	0.18	-0.1
3,666,488	-		ABIE53_003249	0.18	-0.1
3,666,488	-		ABIE53_003249	0.18	-0.2
3,666,488	-		ABIE53_003249	0.18	-1.8
3,666,488	-		ABIE53_003249	0.18	+0.2
3,666,488	-		ABIE53_003249	0.18	+1.4
3,666,488	-		ABIE53_003249	0.18	-0.6
3,666,488	-		ABIE53_003249	0.18	-0.4
3,666,488	-		ABIE53_003249	0.18	+0.6
3,666,488	-		ABIE53_003249	0.18	+0.5
3,666,538	+		ABIE53_003249	0.22	-0.1
3,666,538	+		ABIE53_003249	0.22	+0.2
3,666,538	+		ABIE53_003249	0.22	+0.5
3,666,539	-		ABIE53_003249	0.22	-1.1
3,666,539	-		ABIE53_003249	0.22	+0.3
3,666,539	-		ABIE53_003249	0.22	+0.3
3,666,550	+		ABIE53_003249	0.23	-1.2
3,666,550	+		ABIE53_003249	0.23	-1.6
3,666,550	+		ABIE53_003249	0.23	+1.5
3,666,551	-		ABIE53_003249	0.23	+0.7
3,666,551	-		ABIE53_003249	0.23	+0.0
3,666,671	-		ABIE53_003249	0.33	+0.3