Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22065

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL
4,605,430	-		BWI76_RS22060	0.32	-0.5
4,605,539	-		BWI76_RS22060	0.43	+0.3
4,605,704	+		BWI76_RS22060	0.60	-0.9
4,605,704	+		BWI76_RS22060	0.60	-0.5
4,605,751	+		BWI76_RS22060	0.65	-0.2
4,605,756	+		BWI76_RS22060	0.66	-0.0
4,605,765	+		BWI76_RS22060	0.67	-1.3
4,605,806	+		BWI76_RS22060	0.71	-1.1
4,605,826	+		BWI76_RS22060	0.73	-0.3
4,605,834	+		BWI76_RS22060	0.74	-0.8
4,605,834	-		BWI76_RS22060	0.74	-0.2
4,605,842	-		BWI76_RS22060	0.75	-1.1
4,605,842	-		BWI76_RS22060	0.75	-1.1
4,605,842	-		BWI76_RS22060	0.75	-0.6
4,605,861	+		BWI76_RS22060	0.77	-1.5
4,605,864	-		BWI76_RS22060	0.77	+0.7
4,605,869	-		BWI76_RS22060	0.78	-0.6
4,605,903	-		BWI76_RS22060	0.81	-0.8
4,605,968	-		BWI76_RS22060	0.88	-1.1
4,606,033	-				-0.4
4,606,047	-				-1.1
4,606,068	-				-1.0
4,606,078	+				-0.9
4,606,078	+				-0.3
4,606,084	+				+0.1
4,606,100	+				+0.6
4,606,108	-				+0.1
4,606,110	+				+0.9
4,606,162	-				+0.1
4,606,215	+				-0.1
4,606,223	-				+0.2
4,606,251	-				-0.3
4,606,263	+				-0.2
4,606,265	+				-0.8
4,606,265	+				+0.4
4,606,265	+				+1.2
4,606,273	-				-0.1
4,606,283	-				-0.1
4,606,285	-				+0.3
4,606,325	+				-0.2
4,606,325	+				+0.0
4,606,331	+				-0.3
4,606,332	+				-0.5
4,606,332	-				-0.2
4,606,332	-				-0.5
4,606,333	-				+0.3
4,606,333	-				+0.6
4,606,333	-				+0.7
4,606,333	-				-0.2
4,606,333	-				-0.4
4,606,333	-				+0.6
4,606,333	-				-0.2
4,606,341	-				+0.1
4,606,351	-				+0.2
4,606,352	+				-0.0
4,606,352	+				+0.0
4,606,354	+				-0.2
4,606,354	+				-0.4
4,606,360	-				+0.4
4,606,360	-				-0.2
4,606,360	-				-0.4
4,606,390	+				+0.6
4,606,431	-				-0.2
4,606,571	+		BWI76_RS22065	0.12	+0.4
4,606,579	+		BWI76_RS22065	0.12	-0.1
4,606,579	-		BWI76_RS22065	0.12	-0.8
4,606,605	+		BWI76_RS22065	0.15	+0.6
4,606,668	-		BWI76_RS22065	0.20	-0.2
4,606,681	+		BWI76_RS22065	0.21	-0.5
4,606,770	+		BWI76_RS22065	0.28	+0.4
4,606,786	+		BWI76_RS22065	0.30	-0.4
4,606,794	-		BWI76_RS22065	0.30	-0.2
4,606,794	-		BWI76_RS22065	0.30	-0.4
4,606,794	-		BWI76_RS22065	0.30	+0.1
4,606,823	+		BWI76_RS22065	0.33	+1.3
4,606,823	+		BWI76_RS22065	0.33	-0.2
4,606,826	-		BWI76_RS22065	0.33	-0.4
4,606,826	-		BWI76_RS22065	0.33	-0.1
4,606,831	-		BWI76_RS22065	0.33	+0.3
4,606,863	-		BWI76_RS22065	0.36	-0.4
4,606,876	+		BWI76_RS22065	0.37	-0.6
4,606,906	+		BWI76_RS22065	0.40	+0.1
4,606,914	-		BWI76_RS22065	0.40	+0.1
4,606,922	+		BWI76_RS22065	0.41	-0.8
4,606,924	+		BWI76_RS22065	0.41	+1.6
4,606,924	+		BWI76_RS22065	0.41	+0.2
4,606,932	-		BWI76_RS22065	0.42	-0.6
4,606,932	-		BWI76_RS22065	0.42	-0.3
4,606,932	-		BWI76_RS22065	0.42	+0.0
4,606,932	-		BWI76_RS22065	0.42	-0.1
4,606,940	-		BWI76_RS22065	0.42	+2.2
4,606,944	+		BWI76_RS22065	0.43	-0.1
4,606,945	+		BWI76_RS22065	0.43	-0.9
4,606,949	+		BWI76_RS22065	0.43	-0.0
4,606,949	+		BWI76_RS22065	0.43	+0.4
4,606,949	+		BWI76_RS22065	0.43	+0.1
4,606,949	+		BWI76_RS22065	0.43	-0.4
4,606,949	+		BWI76_RS22065	0.43	-1.2
4,606,949	+		BWI76_RS22065	0.43	-1.2
4,606,952	-		BWI76_RS22065	0.43	+0.2
4,606,952	-		BWI76_RS22065	0.43	-1.3
4,606,952	-		BWI76_RS22065	0.43	-0.3
4,606,957	-		BWI76_RS22065	0.44	+0.3
4,606,957	-		BWI76_RS22065	0.44	-1.2
4,606,957	-		BWI76_RS22065	0.44	+0.6
4,606,957	-		BWI76_RS22065	0.44	+1.5
4,606,957	-		BWI76_RS22065	0.44	+0.1
4,606,957	-		BWI76_RS22065	0.44	-0.5
4,606,957	-		BWI76_RS22065	0.44	-0.2
4,606,957	-				+0.6
4,606,985	-		BWI76_RS22065	0.46	+1.2
4,606,994	+		BWI76_RS22065	0.47	-0.2
4,606,994	+		BWI76_RS22065	0.47	-0.0
4,607,002	-		BWI76_RS22065	0.48	+0.1
4,607,007	-		BWI76_RS22065	0.48	-0.8
4,607,017	-		BWI76_RS22065	0.49	-0.2
4,607,017	-		BWI76_RS22065	0.49	+0.1
4,607,027	-		BWI76_RS22065	0.50	+0.5
4,607,100	+		BWI76_RS22065	0.56	+0.6
4,607,104	+		BWI76_RS22065	0.56	-1.0
4,607,108	-		BWI76_RS22065	0.56	-0.6
4,607,112	-		BWI76_RS22065	0.57	-1.1
4,607,119	-		BWI76_RS22065	0.57	-0.0
4,607,148	+		BWI76_RS22065	0.60	-0.1
4,607,148	+		BWI76_RS22065	0.60	-0.5
4,607,159	+		BWI76_RS22065	0.61	-0.7
4,607,159	+		BWI76_RS22065	0.61	+0.1
4,607,167	-		BWI76_RS22065	0.61	+0.1
4,607,172	-		BWI76_RS22065	0.62	-0.4
4,607,240	+		BWI76_RS22065	0.67	-0.2
4,607,240	+		BWI76_RS22065	0.67	-1.4
4,607,256	-		BWI76_RS22065	0.69	+0.3
4,607,269	-		BWI76_RS22065	0.70	-1.0
4,607,277	+		BWI76_RS22065	0.70	-0.6
4,607,280	+		BWI76_RS22065	0.71	+1.9
4,607,285	+		BWI76_RS22065	0.71	+0.3
4,607,315	-		BWI76_RS22065	0.74	+0.2
4,607,369	+		BWI76_RS22065	0.78	-0.3
4,607,394	+		BWI76_RS22065	0.80	-0.3
4,607,418	+		BWI76_RS22065	0.82	+0.1
4,607,428	+		BWI76_RS22065	0.83	-0.4
4,607,428	+		BWI76_RS22065	0.83	-0.3
4,607,428	+		BWI76_RS22065	0.83	+0.0
4,607,428	+		BWI76_RS22065	0.83	-0.4
4,607,428	+		BWI76_RS22065	0.83	+0.0
4,607,428	+		BWI76_RS22065	0.83	+0.1
4,607,431	-		BWI76_RS22065	0.83	-0.2
4,607,436	-		BWI76_RS22065	0.84	-0.1
4,607,436	-		BWI76_RS22065	0.84	-0.5
4,607,436	-		BWI76_RS22065	0.84	+1.0
4,607,453	+		BWI76_RS22065	0.85	-0.5
4,607,453	+		BWI76_RS22065	0.85	+0.1
4,607,461	-		BWI76_RS22065	0.86	+0.8
4,607,461	-		BWI76_RS22065	0.86	-0.3
4,607,461	-		BWI76_RS22065	0.86	+0.0
4,607,461	-		BWI76_RS22065	0.86	+0.8
4,607,466	+		BWI76_RS22065	0.86	+0.8
4,607,473	+		BWI76_RS22065	0.87	-0.2
4,607,481	-		BWI76_RS22065	0.87	-0.3
4,607,509	+		BWI76_RS22065	0.90	-0.0
4,607,515	+				-0.5
4,607,520	+				+0.0
4,607,520	+				-0.3
4,607,528	-				-0.2
4,607,528	-				+0.1
4,607,601	-				-0.1
4,607,601	-				-0.1
4,607,621	+				-0.2
4,607,653	-				+0.1
4,607,696	+				-0.3
4,607,701	+				-0.2
4,607,709	-				-0.3
4,607,709	-				+0.1
4,607,710	-				-0.9
4,607,904	-		BWI76_RS22070	0.26	+0.2
4,608,001	-		BWI76_RS22070	0.35	-0.2
4,608,183	+		BWI76_RS22070	0.52	-0.2
4,608,196	-		BWI76_RS22070	0.54	-0.4
4,608,220	+		BWI76_RS22070	0.56	+0.2
4,608,388	-		BWI76_RS22070	0.72	-0.4