Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2842
Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,544,982 | - | BT2842 | 0.85 | -1.3 | |
3,545,185 | - | -1.3 | |||
3,545,230 | - | BT2843 | 0.12 | -2.1 | |
3,545,293 | + | BT2843 | 0.18 | -2.8 | |
3,545,555 | + | BT2843 | 0.46 | -1.5 | |
3,545,811 | - | BT2843 | 0.72 | -1.8 | |
3,545,822 | + | BT2843 | 0.73 | -2.9 | |
3,545,828 | - | BT2843 | 0.74 | -3.1 |
Or see this region's nucleotide sequence