Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2061

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
2,578,963	-				-0.9
2,578,993	-				-3.0
2,579,133	+				-0.5
2,579,156	+				+0.8
2,579,849	+				-0.7
2,579,880	+				-0.0
2,580,741	-				-0.8
2,580,890	+				-1.6
2,580,890	+				-1.0
2,580,972	+				-0.0
2,580,988	+		BT2062	0.11	-5.6
2,580,989	-		BT2062	0.11	-2.5
2,580,995	+		BT2062	0.12	-1.8
2,580,996	-		BT2062	0.12	+1.1
2,580,996	-		BT2062	0.12	-2.6
2,580,998	-		BT2062	0.12	-1.9
2,580,998	-		BT2062	0.12	-4.2
2,580,999	+		BT2062	0.12	-2.6
2,580,999	+		BT2062	0.12	-1.0
2,580,999	+		BT2062	0.12	-2.9
2,580,999	+		BT2062	0.12	-0.8
2,580,999	+		BT2062	0.12	-2.8
2,581,000	-		BT2062	0.12	-2.6
2,581,000	-		BT2062	0.12	-2.6
2,581,009	-		BT2062	0.13	-4.0
2,581,058	-		BT2062	0.18	-4.2
2,581,061	+		BT2062	0.19	-0.5
2,581,061	+				-0.5
2,581,149	-		BT2062	0.28	-1.8
2,581,282	-		BT2062	0.41	-2.7
2,581,306	-		BT2062	0.44	-3.5
2,581,750	+		BT2062	0.89	-2.5