Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2058

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
2,576,227	+		BT2056	0.65	-1.6
2,576,235	+		BT2056	0.66	-1.0
2,576,236	-		BT2056	0.66	-0.4
2,576,301	+		BT2056	0.75	+0.1
2,576,394	+		BT2056	0.87	-1.6
2,576,400	+		BT2056	0.88	-2.6
2,576,484	+				+0.9
2,576,484	+				-0.3
2,576,488	+				-0.5
2,576,489	-				+0.9
2,576,539	+				+0.5
2,576,543	-				-1.4
2,576,719	+		BT2057	0.32	-0.5
2,576,719	+		BT2057	0.32	+1.6
2,576,740	+		BT2057	0.35	-1.8
2,576,752	-		BT2057	0.37	-1.5
2,576,773	+		BT2057	0.39	+0.2
2,576,893	+		BT2057	0.56	-0.0
2,576,947	-		BT2057	0.64	+0.1
2,576,947	-		BT2057	0.64	-0.5
2,576,966	+		BT2057	0.66	-1.0
2,576,968	+		BT2057	0.67	+0.3
2,576,968	+		BT2057	0.67	+0.7
2,576,968	+		BT2057	0.67	+0.5
2,576,969	-		BT2057	0.67	+2.3
2,577,038	+		BT2057	0.76	-0.9
2,577,125	+		BT2057	0.89	+0.4
2,577,128	-		BT2057	0.89	-0.0
2,577,165	+				-1.0
2,577,200	-				-0.3
2,578,253	-				+2.1
2,578,579	-		BT2059	0.46	+0.5
2,578,607	-		BT2059	0.50	-2.0
2,578,628	-		BT2059	0.53	+2.2
2,578,771	-		BT2059	0.74	+0.5
2,578,963	-				-0.9
2,578,993	-				-3.0
2,579,133	+				-0.5
2,579,156	+				+0.8