Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2011

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
2,525,831	+		BT2010	0.37	-0.1
2,525,835	+		BT2010	0.38	-1.5
2,526,041	+				+0.6
2,526,659	+				-0.2
2,526,659	+				-0.1
2,526,660	-				-0.6
2,526,668	+				-0.0
2,526,669	-				-1.9
2,526,693	+				-0.5
2,526,693	+				+0.9
2,526,694	-				+3.9
2,526,736	+				+0.4
2,526,871	-		BT2012	0.17	+2.6
2,526,891	+		BT2012	0.18	+0.1
2,526,922	+		BT2012	0.20	-0.3
2,526,923	-				+0.4
2,526,925	+		BT2012	0.21	-0.7
2,526,940	-		BT2012	0.22	-1.4
2,526,940	-		BT2012	0.22	-0.8
2,526,951	+		BT2012	0.23	-2.0
2,526,952	-		BT2012	0.23	+1.6
2,527,008	+		BT2012	0.27	-1.2
2,527,009	-		BT2012	0.27	+0.1
2,527,009	-		BT2012	0.27	+0.8
2,527,045	-		BT2012	0.30	-0.7
2,527,109	+				+0.6
2,527,109	+		BT2012	0.35	-3.3
2,527,114	-		BT2012	0.35	-0.6
2,527,192	-		BT2012	0.41	-0.7
2,527,296	-		BT2012	0.49	+0.1
2,527,296	-		BT2012	0.49	-1.6
2,527,350	+		BT2012	0.54	-2.3
2,527,388	+		BT2012	0.57	-0.5
2,527,388	+		BT2012	0.57	-1.3
2,527,463	-		BT2012	0.62	-1.2
2,527,522	+		BT2012	0.67	-0.4
2,527,566	+		BT2012	0.70	-0.4
2,527,567	-		BT2012	0.70	-0.2
2,527,634	+		BT2012	0.76	-0.4
2,527,687	+		BT2012	0.80	-0.9