Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0028

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
21,583	-				-2.2
21,657	+		BT0027	0.21	+0.2
21,657	+		BT0027	0.21	-0.6
21,658	-		BT0027	0.21	-1.8
21,658	-		BT0027	0.21	-1.6
21,658	-		BT0027	0.21	+1.0
21,658	-		BT0027	0.21	-0.3
21,679	-		BT0027	0.25	+0.3
21,715	-		BT0027	0.32	+0.3
21,719	-		BT0027	0.33	-1.3
21,727	+		BT0027	0.34	+1.5
21,728	-		BT0027	0.34	-0.8
21,802	-		BT0027	0.48	+0.8
21,803	+		BT0027	0.48	-0.5
21,804	-		BT0027	0.48	-0.0
21,957	+		BT0027	0.77	-0.3
21,969	+		BT0027	0.79	+1.3
21,969	+		BT0027	0.79	-0.6
22,102	+				-1.2
22,115	+				-0.8
22,119	-				-0.6
22,258	-				-1.3
22,259	+				-0.0
22,336	-				-1.1
22,440	-				-0.1
22,614	+		BT0028	0.22	+0.5
22,634	+		BT0028	0.29	-1.3
22,635	-		BT0028	0.30	+0.5
22,635	-		BT0028	0.30	-0.5
22,639	-		BT0028	0.31	-0.8
22,650	+		BT0028	0.35	-1.0
22,685	-		BT0028	0.48	-2.5
22,690	-		BT0028	0.49	-2.8
22,841	-				+0.5
22,861	-				-1.1
22,900	+				+0.8
23,039	+				+0.8
23,060	+				-1.3
23,078	+				-1.5
23,079	-				+1.2
23,079	-				-1.2
23,136	+				+0.7
23,136	+				-2.1
23,139	-				-1.1
23,139	-				-0.7
23,139	-				-0.8
23,231	+				-1.8
23,296	-		BT0029	0.12	-1.0
23,329	-		BT0029	0.13	-0.9
23,347	-		BT0029	0.14	-2.0
23,412	-		BT0029	0.16	+1.0
23,412	-		BT0029	0.16	-0.4
23,543	+		BT0029	0.20	-0.7
23,544	-		BT0029	0.20	-2.5
23,586	+		BT0029	0.21	-1.5
23,587	-		BT0029	0.21	+1.5
23,631	+		BT0029	0.22	-1.9
23,679	+		BT0029	0.24	-0.9
23,687	-		BT0029	0.24	-0.6
23,687	-		BT0029	0.24	+1.8
23,739	+		BT0029	0.26	+0.1
23,789	+		BT0029	0.27	+0.5
23,789	+		BT0029	0.27	-0.8