Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10720 and BWI76_RS10725 are separated by 516 nucleotides BWI76_RS10725 and BWI76_RS10730 are separated by 139 nucleotides
BWI76_RS10720: BWI76_RS10720 - putrescine importer, at 2,265,191 to 2,266,582
_RS10720
BWI76_RS10725: BWI76_RS10725 - hypothetical protein, at 2,267,099 to 2,267,323
_RS10725
BWI76_RS10730: BWI76_RS10730 - bifunctional glucose-1-phosphatase/inositol phosphatase, at 2,267,463 to 2,268,710
_RS10730
Position (kb)
2267
2268 Strain fitness (log2 ratio)
-1
0
1
2 at 2266.112 kb on - strand, within BWI76_RS10720 at 2266.492 kb on - strand at 2266.506 kb on - strand at 2266.551 kb on - strand at 2266.567 kb on + strand at 2266.567 kb on + strand at 2266.570 kb on - strand at 2266.598 kb on + strand at 2266.739 kb on - strand at 2266.776 kb on + strand at 2266.776 kb on + strand at 2267.058 kb on + strand at 2267.064 kb on + strand at 2267.064 kb on + strand at 2267.066 kb on - strand at 2267.148 kb on - strand, within BWI76_RS10725 at 2267.264 kb on - strand, within BWI76_RS10725 at 2267.502 kb on + strand at 2267.510 kb on - strand at 2267.535 kb on - strand at 2267.592 kb on - strand at 2267.728 kb on - strand, within BWI76_RS10730 at 2267.861 kb on - strand, within BWI76_RS10730
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL remove 2,266,112 - BWI76_RS10720 0.66 +0.2 2,266,492 - -0.4 2,266,506 - -0.6 2,266,551 - +0.1 2,266,567 + -0.1 2,266,567 + -0.7 2,266,570 - -1.5 2,266,598 + -0.3 2,266,739 - +0.2 2,266,776 + -0.0 2,266,776 + -0.1 2,267,058 + +0.9 2,267,064 + -0.3 2,267,064 + -0.1 2,267,066 - -0.1 2,267,148 - BWI76_RS10725 0.22 +0.0 2,267,264 - BWI76_RS10725 0.73 -0.1 2,267,502 + -0.3 2,267,510 - +0.0 2,267,535 - +0.5 2,267,592 - +2.2 2,267,728 - BWI76_RS10730 0.21 +0.2 2,267,861 - BWI76_RS10730 0.32 +0.3
Or see this region's nucleotide sequence