Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19760 and BWI76_RS19765 are separated by 41 nucleotides BWI76_RS19765 and BWI76_RS19770 are separated by 426 nucleotides
BWI76_RS19760: BWI76_RS19760 - GTP-binding protein, at 4,131,142 to 4,132,119
_RS19760
BWI76_RS19765: BWI76_RS19765 - membrane protein, at 4,132,161 to 4,132,868
_RS19765
BWI76_RS19770: BWI76_RS19770 - bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase, at 4,133,295 to 4,133,864
_RS19770
Position (kb)
4132
4133 Strain fitness (log2 ratio)
-2
-1
0
1 at 4131.499 kb on - strand, within BWI76_RS19760 at 4131.616 kb on + strand, within BWI76_RS19760 at 4131.690 kb on + strand, within BWI76_RS19760 at 4131.852 kb on - strand, within BWI76_RS19760 at 4132.158 kb on - strand at 4132.295 kb on + strand, within BWI76_RS19765 at 4132.314 kb on + strand, within BWI76_RS19765 at 4132.374 kb on + strand, within BWI76_RS19765 at 4132.382 kb on - strand, within BWI76_RS19765 at 4132.446 kb on + strand, within BWI76_RS19765 at 4132.537 kb on - strand, within BWI76_RS19765 at 4132.585 kb on + strand, within BWI76_RS19765 at 4132.729 kb on - strand, within BWI76_RS19765 at 4132.775 kb on - strand, within BWI76_RS19765 at 4132.792 kb on - strand, within BWI76_RS19765 at 4132.810 kb on + strand at 4132.900 kb on + strand at 4133.020 kb on - strand at 4133.023 kb on + strand at 4133.124 kb on - strand at 4133.124 kb on - strand at 4133.124 kb on - strand at 4133.281 kb on + strand at 4133.289 kb on - strand at 4133.289 kb on - strand at 4133.358 kb on + strand, within BWI76_RS19770 at 4133.366 kb on - strand, within BWI76_RS19770 at 4133.847 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x remove 4,131,499 - BWI76_RS19760 0.37 -0.0 4,131,616 + BWI76_RS19760 0.48 -0.5 4,131,690 + BWI76_RS19760 0.56 -0.5 4,131,852 - BWI76_RS19760 0.73 -1.3 4,132,158 - -0.3 4,132,295 + BWI76_RS19765 0.19 -0.5 4,132,314 + BWI76_RS19765 0.22 -1.2 4,132,374 + BWI76_RS19765 0.30 -0.8 4,132,382 - BWI76_RS19765 0.31 -1.5 4,132,446 + BWI76_RS19765 0.40 -1.0 4,132,537 - BWI76_RS19765 0.53 -0.7 4,132,585 + BWI76_RS19765 0.60 -0.7 4,132,729 - BWI76_RS19765 0.80 -1.8 4,132,775 - BWI76_RS19765 0.87 -0.1 4,132,792 - BWI76_RS19765 0.89 -0.9 4,132,810 + +1.1 4,132,900 + -0.1 4,133,020 - -0.2 4,133,023 + -0.3 4,133,124 - +0.9 4,133,124 - -1.1 4,133,124 - -0.0 4,133,281 + +0.4 4,133,289 - -0.1 4,133,289 - +0.5 4,133,358 + BWI76_RS19770 0.11 +0.7 4,133,366 - BWI76_RS19770 0.12 +0.4 4,133,847 + -0.3
Or see this region's nucleotide sequence