Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10820 and BWI76_RS10825 are separated by 4 nucleotides BWI76_RS10825 and BWI76_RS10830 are separated by 233 nucleotides
BWI76_RS10820: BWI76_RS10820 - iron uptake system protein EfeO, at 2,286,296 to 2,287,423
_RS10820
BWI76_RS10825: BWI76_RS10825 - deferrochelatase/peroxidase EfeB, at 2,287,428 to 2,288,708
_RS10825
BWI76_RS10830: BWI76_RS10830 - phosphate starvation-inducible protein PhoH, at 2,288,942 to 2,290,006
_RS10830
Position (kb)
2287
2288
2289 Strain fitness (log2 ratio)
-2
-1
0
1 at 2286.677 kb on + strand, within BWI76_RS10820 at 2286.695 kb on - strand, within BWI76_RS10820 at 2286.761 kb on + strand, within BWI76_RS10820 at 2286.807 kb on - strand, within BWI76_RS10820 at 2287.341 kb on - strand at 2287.424 kb on + strand at 2287.655 kb on - strand, within BWI76_RS10825 at 2287.747 kb on - strand, within BWI76_RS10825 at 2288.336 kb on - strand, within BWI76_RS10825 at 2288.580 kb on + strand, within BWI76_RS10825 at 2288.675 kb on + strand at 2288.911 kb on - strand at 2288.981 kb on - strand at 2288.982 kb on + strand at 2289.081 kb on - strand, within BWI76_RS10830 at 2289.090 kb on + strand, within BWI76_RS10830 at 2289.189 kb on + strand, within BWI76_RS10830 at 2289.234 kb on - strand, within BWI76_RS10830 at 2289.537 kb on - strand, within BWI76_RS10830 at 2289.668 kb on + strand, within BWI76_RS10830 at 2289.708 kb on - strand, within BWI76_RS10830
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x remove 2,286,677 + BWI76_RS10820 0.34 -0.7 2,286,695 - BWI76_RS10820 0.35 -0.8 2,286,761 + BWI76_RS10820 0.41 +0.1 2,286,807 - BWI76_RS10820 0.45 -0.3 2,287,341 - -0.2 2,287,424 + -0.1 2,287,655 - BWI76_RS10825 0.18 -1.7 2,287,747 - BWI76_RS10825 0.25 -0.5 2,288,336 - BWI76_RS10825 0.71 -0.8 2,288,580 + BWI76_RS10825 0.90 -1.5 2,288,675 + -0.4 2,288,911 - -0.3 2,288,981 - -2.7 2,288,982 + -0.0 2,289,081 - BWI76_RS10830 0.13 -0.7 2,289,090 + BWI76_RS10830 0.14 +0.2 2,289,189 + BWI76_RS10830 0.23 -0.2 2,289,234 - BWI76_RS10830 0.27 -0.2 2,289,537 - BWI76_RS10830 0.56 -0.5 2,289,668 + BWI76_RS10830 0.68 +0.4 2,289,708 - BWI76_RS10830 0.72 +0.3
Or see this region's nucleotide sequence