Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1976

Experiment: Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml
2,485,956	-				-0.7
2,486,046	-				-1.0
2,486,054	+				-2.4
2,486,525	+		BT1976	0.75	-2.3
2,486,568	-		BT1976	0.81	-2.0
2,486,571	+		BT1976	0.82	-1.3
2,486,572	-		BT1976	0.82	-1.9
2,486,663	+				-0.6
2,486,886	-				-3.4
2,487,059	+				+0.6
2,487,076	+				-1.1
2,487,077	-				-0.0
2,487,121	-				-1.4
2,487,187	+				-0.3
2,487,252	-				-0.3
2,487,267	+				-1.9
2,487,277	-				-0.6
2,487,278	+				-0.3
2,487,330	+				+0.6
2,487,457	+				-0.8
2,487,482	-				-1.9
2,487,482	-				-1.4
2,487,581	+				-0.4
2,487,597	-				-0.4