Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1685

Experiment: Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml
2,079,535	+		BT1684	0.23	-1.5
2,079,536	-		BT1684	0.23	-1.5
2,079,653	+		BT1684	0.34	-1.6
2,079,835	+		BT1684	0.53	-1.9
2,079,839	-		BT1684	0.53	-1.6
2,079,959	+		BT1684	0.65	-1.5
2,079,960	-		BT1684	0.65	-2.8
2,079,960	-		BT1684	0.65	-1.2
2,079,996	+		BT1684	0.69	-2.3
2,080,083	+		BT1684	0.77	-1.4
2,080,084	-		BT1684	0.78	-1.9
2,080,084	-		BT1684	0.78	+0.7
2,080,114	+		BT1684	0.81	-2.0
2,080,175	-		BT1684	0.87	-2.1
2,080,175	-		BT1684	0.87	-2.7
2,080,175	-		BT1684	0.87	-1.3
2,080,175	-		BT1684	0.87	-3.8
2,080,241	+				-2.5
2,080,369	-				-0.6
2,080,369	-				-1.6
2,080,480	+				-0.3
2,080,719	+		BT1685	0.59	-3.5
2,080,743	+		BT1685	0.65	+1.3