Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_004805

Experiment: RCH2_defined_glucose_5mM with caffeic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with caffeic 1 mM
1,009,479	+		ABIE53_004804	0.45	+1.8
1,009,653	+		ABIE53_004804	0.62	-3.1
1,009,653	+		ABIE53_004804	0.62	-3.1
1,009,653	+		ABIE53_004804	0.62	-3.9
1,009,653	+		ABIE53_004804	0.62	-1.8
1,009,653	+		ABIE53_004804	0.62	-1.5
1,009,653	+		ABIE53_004804	0.62	+0.2
1,009,653	+		ABIE53_004804	0.62	-1.4
1,009,653	+		ABIE53_004804	0.62	-1.6
1,009,653	+		ABIE53_004804	0.62	-1.2
1,009,653	+		ABIE53_004804	0.62	-4.8
1,009,653	+		ABIE53_004804	0.62	+0.2
1,009,653	+		ABIE53_004804	0.62	-1.8
1,009,653	+		ABIE53_004804	0.62	-1.8
1,009,653	+		ABIE53_004804	0.62	-0.2
1,009,653	+		ABIE53_004804	0.62	-1.8
1,009,653	+		ABIE53_004804	0.62	-0.5
1,009,653	+		ABIE53_004804	0.62	-0.5
1,009,654	-		ABIE53_004804	0.62	-2.2
1,009,654	-		ABIE53_004804	0.62	-1.4
1,009,654	-		ABIE53_004804	0.62	+0.8
1,009,654	-		ABIE53_004804	0.62	-1.0
1,009,654	-		ABIE53_004804	0.62	-2.1
1,009,654	-		ABIE53_004804	0.62	-2.7
1,009,654	-		ABIE53_004804	0.62	-1.6
1,009,654	-		ABIE53_004804	0.62	-2.6
1,009,654	-		ABIE53_004804	0.62	-2.8
1,009,818	+		ABIE53_004804	0.77	-3.1
1,009,818	+		ABIE53_004804	0.77	-0.2
1,009,818	+		ABIE53_004804	0.77	-1.0
1,009,818	+		ABIE53_004804	0.77	-1.6
1,009,818	+		ABIE53_004804	0.77	-3.7
1,009,818	+		ABIE53_004804	0.77	-3.2
1,009,819	-		ABIE53_004804	0.77	+0.8
1,009,819	-		ABIE53_004804	0.77	-3.2
1,009,883	+		ABIE53_004804	0.83	-2.4
1,009,883	+		ABIE53_004804	0.83	-2.3
1,009,980	+				-0.9
1,010,061	+				-2.2
1,010,061	+				+0.4
1,010,087	+				+0.0
1,010,087	+				+3.2
1,010,087	+				+1.0
1,010,088	-				+0.2
1,010,088	-				+1.8
1,010,088	-				+0.2
1,010,088	-				+0.4
1,010,088	-				-0.3
1,010,088	-				+0.5
1,010,088	-				+0.2
1,010,088	-				-0.8
1,010,088	-				+0.6
1,010,108	+				-0.3
1,010,108	+				+2.7
1,010,108	+				-1.2
1,010,109	-				+0.7
1,010,132	-				-1.4
1,010,132	-				-1.6
1,010,144	-				+1.6
1,010,144	-				-0.5
1,010,144	-				+0.9
1,010,183	+				+0.3
1,010,183	+				-0.4
1,010,184	-				+0.9
1,010,235	+				-0.8
1,010,235	+				-1.4
1,010,235	+				-1.0
1,010,235	+				+4.4
1,010,237	+				+0.5
1,010,237	+				+0.7
1,010,237	+				+0.0
1,010,242	+				+1.8
1,010,321	+				+1.2
1,010,339	+				+0.1
1,010,339	+				+0.6
1,011,579	+				-1.2
1,011,579	+				-0.4
1,011,579	+				+0.2
1,011,579	+				+0.3
1,011,579	+				+1.0
1,011,579	+				-0.2
1,011,579	+				-1.5
1,011,579	+				-0.3
1,011,579	+				-1.4
1,011,579	+				+1.2
1,011,579	+				-1.0
1,011,579	+				+0.3
1,011,579	+				+1.5
1,011,580	-				-0.3
1,011,580	-				+0.5
1,011,584	+				-0.8
1,011,584	+				+1.3
1,011,584	+				-1.4
1,011,584	+				+0.7
1,011,589	+				-1.1
1,011,589	+				+1.0
1,011,606	+				+1.3
1,011,606	+				-1.6
1,011,607	-				+0.7
1,011,664	+				+0.1
1,011,677	+				-1.4
1,011,677	+				+2.5
1,011,677	+				+0.7
1,011,678	-				+1.1
1,011,678	-				+0.2
1,011,678	-				+0.2
1,011,678	-				+0.5
1,011,678	-				-1.5
1,011,678	-				+0.5
1,011,679	+				-1.6
1,011,679	+				-2.4
1,011,679	+				+0.8
1,011,770	-				+2.8
1,011,911	+				+0.9
1,011,911	+				-0.1
1,011,911	+				-0.8
1,011,911	+				+1.5
1,011,911	+				+1.8
1,011,911	+				-0.9
1,011,912	-				+0.4
1,011,912	-				-0.1
1,011,912	-				+1.0
1,011,912	-				+1.4
1,011,929	+				+0.1
1,011,929	+				+1.0
1,011,929	+				+2.9
1,011,929	+				+0.2
1,011,930	-				-2.4
1,011,930	-				-0.6
1,011,930	-				+2.3
1,011,930	-				+1.2