Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001589

Experiment: RCH2_defined_glucose_5mM with caffeic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with caffeic 1 mM
1,771,256	+				+0.3
1,771,304	+				+2.3
1,771,304	+				+1.3
1,771,304	+				-0.3
1,771,304	+				-2.1
1,771,304	+				-0.6
1,771,304	+				+1.7
1,771,304	+				+1.7
1,771,326	+				+1.5
1,771,326	+				+1.4
1,771,326	+				-0.3
1,771,480	+		ABIE53_001588	0.16	-1.1
1,771,480	+		ABIE53_001588	0.16	+1.7
1,771,480	+		ABIE53_001588	0.16	-1.1
1,771,480	+		ABIE53_001588	0.16	-2.8
1,771,480	+		ABIE53_001588	0.16	-2.1
1,771,480	+		ABIE53_001588	0.16	-1.3
1,771,480	+		ABIE53_001588	0.16	-0.9
1,771,480	+		ABIE53_001588	0.16	-2.4
1,771,480	+		ABIE53_001588	0.16	-1.3
1,771,587	+		ABIE53_001588	0.30	-2.8
1,771,587	+		ABIE53_001588	0.30	-2.8
1,771,587	+		ABIE53_001588	0.30	-2.3
1,771,863	+		ABIE53_001588	0.65	-0.9
1,771,863	+		ABIE53_001588	0.65	-1.6
1,771,989	+		ABIE53_001588	0.81	-0.9
1,772,026	+		ABIE53_001588	0.86	+1.7
1,772,190	+				-1.5
1,772,194	+				-0.6
1,772,194	+				-0.1
1,772,194	+				+0.3
1,772,194	+				+1.7
1,772,592	+		ABIE53_001589	0.90	+0.4
1,772,687	+				-0.4
1,772,689	+				-1.1
1,772,689	+				+0.1
1,772,711	+				-0.6
1,772,711	+				-1.3
1,772,807	+				-0.7
1,772,811	+				+0.4
1,772,811	+				-0.3
1,772,811	+				+2.6
1,772,811	+				+0.4
1,772,811	+				+0.4
1,772,885	+				-0.1
1,772,885	+				-0.9
1,772,885	+				+0.4
1,772,885	+				-0.9
1,772,885	+				-0.2
1,772,918	+				-0.6
1,772,918	+				+1.7
1,773,326	+				+0.1