Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4646

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
6,079,976	-		BT4645	0.46	+1.2
6,080,119	-		BT4645	0.55	-0.0
6,080,148	-		BT4645	0.57	-0.2
6,080,189	+		BT4645	0.60	-0.6
6,080,189	+		BT4645	0.60	+0.0
6,080,190	-		BT4645	0.60	-0.3
6,080,270	+		BT4645	0.65	-1.4
6,080,294	+		BT4645	0.67	+0.3
6,080,294	+		BT4645	0.67	+0.4
6,080,295	-		BT4645	0.67	-0.4
6,080,394	-		BT4645	0.73	-0.1
6,080,460	-		BT4645	0.78	-1.8
6,080,482	-		BT4645	0.79	-2.9
6,080,491	+		BT4645	0.80	-0.7
6,080,512	+		BT4645	0.81	-1.8
6,080,512	+		BT4645	0.81	+0.4
6,080,513	-		BT4645	0.81	-1.0
6,080,513	-		BT4645	0.81	-0.2
6,080,513	-		BT4645	0.81	-0.1
6,080,513	-		BT4645	0.81	-0.0
6,080,513	-		BT4645	0.81	+0.0
6,080,513	-		BT4645	0.81	-0.4
6,080,663	+				+1.3
6,080,674	-				+0.2
6,080,674	-				-0.2
6,080,677	-				+0.8
6,080,736	-				-0.3
6,080,861	+				+1.4
6,080,930	+		BT4646	0.36	+0.6
6,080,960	-		BT4646	0.53	+0.1
6,080,960	-		BT4646	0.53	+0.3
6,081,015	-		BT4646	0.84	+0.2
6,081,068	-				-0.1
6,081,146	-				-0.2
6,081,333	-		BT4647	0.17	-0.6
6,081,335	-		BT4647	0.17	-1.1
6,081,449	-		BT4647	0.39	+0.7
6,081,496	+		BT4647	0.47	+1.8
6,081,517	-		BT4647	0.51	+0.4
6,081,551	-		BT4647	0.58	-0.3
6,081,614	-		BT4647	0.69	-0.8
6,081,677	+		BT4647	0.81	-1.4
6,081,706	+		BT4647	0.86	-1.8
6,081,762	-				-0.8
6,081,766	-				+0.6
6,081,766	-				+1.1
6,081,929	+		BT4648	0.41	+0.6