Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4103

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
5,362,182	-				+1.9
5,362,184	-				-1.3
5,362,184	-				-0.2
5,362,212	+				-1.8
5,362,213	-				-0.5
5,362,229	+				-0.2
5,362,230	-				-1.6
5,362,230	-				-0.3
5,362,353	-				+1.0
5,362,353	-				-0.9
5,362,365	+				-2.2
5,362,366	-				-1.4
5,362,376	+				-0.4
5,362,420	-		BT4102	0.24	+0.2
5,362,481	+		BT4102	0.52	+0.8
5,362,486	-		BT4102	0.54	-0.6
5,362,493	+		BT4102	0.57	-0.7
5,362,718	+		BT4103	0.14	-0.8
5,362,760	+		BT4103	0.19	-0.1
5,362,761	-		BT4103	0.19	-0.7
5,362,763	+		BT4103	0.19	+0.2
5,362,764	-		BT4103	0.20	-0.5
5,362,863	-		BT4103	0.32	+0.8
5,362,866	+		BT4103	0.32	+1.4
5,363,040	-		BT4103	0.53	-0.8
5,363,119	-		BT4103	0.63	+3.7
5,363,125	-		BT4103	0.64	+1.2
5,363,131	-		BT4103	0.64	+0.4
5,363,231	-		BT4103	0.76	-0.4
5,363,326	+		BT4103	0.88	+0.6
5,363,347	-				-0.4
5,363,439	-				+0.8
5,363,477	+				-0.6
5,363,478	-				-1.4
5,363,661	+				+1.0
5,363,661	+				-0.1
5,363,760	+				-0.9
5,363,761	-				-0.6
5,363,924	-		BT4104	0.11	-0.4
5,363,924	-		BT4104	0.11	+0.3
5,363,925	+		BT4104	0.11	-0.0
5,363,995	+		BT4104	0.14	-0.4
5,364,001	+		BT4104	0.14	-0.7
5,364,054	+		BT4104	0.15	+0.9
5,364,198	+		BT4104	0.20	-0.5
5,364,250	+		BT4104	0.21	-0.6
5,364,335	+		BT4104	0.24	-0.2
5,364,336	-		BT4104	0.24	-0.2
5,364,369	+		BT4104	0.25	+1.1