Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3213
Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6 |
---|---|---|---|---|---|
remove | |||||
4,104,936 | + | BT3211 | 0.85 | -0.4 | |
4,104,936 | + | BT3211 | 0.85 | -0.2 | |
4,104,950 | + | +1.9 | |||
4,105,793 | + | -1.4 | |||
4,105,898 | + | -0.1 | |||
4,105,952 | + | BT3213 | 0.17 | +0.5 | |
4,106,306 | + | BT3213 | 0.66 | +0.5 | |
4,106,306 | + | BT3213 | 0.66 | +2.1 | |
4,106,380 | + | BT3213 | 0.76 | -0.1 | |
4,106,556 | + | -0.5 |
Or see this region's nucleotide sequence