Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2142

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
2,695,224	-		BT2141	0.22	-0.6
2,695,224	-		BT2141	0.22	-0.1
2,695,226	-		BT2141	0.23	-0.2
2,695,427	+		BT2141	0.38	-0.7
2,695,451	+		BT2141	0.40	-0.1
2,695,484	+		BT2141	0.43	-2.8
2,695,514	+		BT2141	0.45	+0.8
2,695,514	+		BT2141	0.45	+0.3
2,695,514	+		BT2141	0.45	-1.6
2,695,730	+		BT2141	0.62	+0.5
2,695,749	-		BT2141	0.64	-1.2
2,695,858	+		BT2141	0.73	+0.9
2,695,859	-		BT2141	0.73	-0.3
2,695,901	-		BT2141	0.76	-0.2
2,695,901	-		BT2141	0.76	+3.4
2,695,943	-		BT2141	0.79	+1.1
2,696,022	-		BT2141	0.86	+1.4
2,696,022	-		BT2141	0.86	+0.8
2,696,045	+		BT2141	0.87	+0.5
2,696,047	+		BT2141	0.88	-0.6
2,696,069	+		BT2141	0.89	+0.9
2,696,082	+				+0.2
2,696,197	+				+0.7
2,696,308	-		BT2142	0.11	-1.4
2,696,433	-		BT2142	0.25	+1.4
2,696,703	-		BT2142	0.55	-0.8
2,696,996	-		BT2142	0.88	+0.1
2,697,132	+				-0.5
2,697,161	+				-0.9
2,697,184	+				-0.6
2,697,394	+				-0.0