Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1947

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
2,446,215	+		BT1945	0.41	+2.8
2,446,243	-		BT1945	0.45	-1.6
2,446,269	+		BT1945	0.48	+0.6
2,446,270	-		BT1945	0.48	+0.7
2,446,271	+		BT1945	0.48	-1.6
2,446,368	+		BT1945	0.61	-0.2
2,446,371	-		BT1945	0.61	-0.7
2,446,371	-		BT1945	0.61	-0.2
2,446,602	+				-0.7
2,446,602	+				-0.5
2,446,696	-				-0.2
2,446,819	+		BT1946	0.13	-0.5
2,446,819	+		BT1946	0.13	-0.9
2,447,028	-		BT1946	0.67	+1.2
2,447,156	+				-0.2
2,447,431	-		BT1947	0.59	+0.5
2,447,483	+		BT1947	0.72	+0.9
2,447,694	+				+0.8
2,447,726	-		BT1948	0.20	-0.7
2,447,776	-		BT1948	0.39	-0.3
2,447,929	-				+0.8
2,447,957	-				-0.3
2,448,016	-				-0.3
2,448,016	-				-0.4
2,448,051	+				-0.5
2,448,059	-				+0.4
2,448,095	-				+0.4
2,448,100	+				-1.2
2,448,131	-				+0.9
2,448,131	-				-0.1
2,448,150	+				+0.4
2,448,181	+				-1.8
2,448,182	-				+0.7
2,448,182	-				+0.1
2,448,182	-				+0.4
2,448,182	-				-0.4
2,448,182	-				+0.8
2,448,189	-				+0.1
2,448,195	-				-0.8
2,448,195	-				-0.6
2,448,259	-				+0.3
2,448,279	+				-0.6
2,448,279	+				-1.1
2,448,280	-				-0.3
2,448,280	-				-1.2
2,448,292	+				+0.9
2,448,293	-				+0.2
2,448,359	-				-1.3
2,448,382	+				-1.0
2,448,383	-				-1.0
2,448,391	-				-3.1
2,448,403	-				-1.0
2,448,403	-				-1.9
2,448,428	-				+0.1
2,448,432	-				-0.3
2,448,436	-				-1.2
2,448,436	-				+1.2
2,448,436	-				-2.2
2,448,439	+				-0.1
2,448,440	-				-0.9
2,448,441	+				+0.1
2,448,483	+				+0.4
2,448,518	+				+0.3
2,448,518	+				+0.4
2,448,519	-				+0.8
2,448,524	-				-0.4
2,448,575	+		BT1949	0.11	-4.2
2,448,575	+		BT1949	0.11	-1.6
2,448,576	-		BT1949	0.11	-0.4
2,448,576	-		BT1949	0.11	-0.6
2,448,576	-		BT1949	0.11	+0.2