Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1817

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
2,278,489	+		BT1815	0.51	-1.1
2,278,490	-		BT1815	0.51	-1.7
2,278,490	-		BT1815	0.51	-0.2
2,278,490	-		BT1815	0.51	-0.5
2,278,490	-		BT1815	0.51	-0.6
2,278,723	+		BT1815	0.74	+1.1
2,278,723	+		BT1815	0.74	-0.8
2,278,838	+		BT1815	0.86	-0.6
2,278,852	-		BT1815	0.87	-0.6
2,279,012	-				+0.0
2,279,037	-				-0.4
2,279,184	-		BT1816	0.40	-0.5
2,279,422	-				+0.8
2,279,665	+		BT1817	0.45	-0.5
2,279,682	-		BT1817	0.48	+0.3
2,279,733	+		BT1817	0.57	+0.2
2,279,861	+		BT1817	0.80	+0.1
2,279,870	-		BT1817	0.82	-0.2
2,279,870	-		BT1817	0.82	+0.6
2,279,911	-		BT1817	0.89	-0.2
2,279,942	-				-1.1
2,279,944	-				-0.8
2,279,944	-				-0.9
2,280,034	+				+0.4
2,280,055	+				-0.2
2,280,123	+				-0.2
2,280,292	+		BT1818	0.40	-1.8
2,280,356	+		BT1818	0.56	-1.4
2,280,568	-				-0.5
2,280,577	+				-0.8
2,280,592	-				+0.2
2,280,652	+		BT1819	0.13	-1.0
2,280,653	-		BT1819	0.13	-0.1
2,280,655	-		BT1819	0.14	+0.6
2,280,659	-		BT1819	0.16	-0.3
2,280,692	+		BT1819	0.31	-0.7
2,280,693	-		BT1819	0.32	-0.8
2,280,764	+		BT1819	0.64	-1.7
2,280,765	-		BT1819	0.64	+0.9
2,280,818	-		BT1819	0.89	-0.6
2,280,818	-		BT1819	0.89	+0.8