Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1758

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
2,170,632	-				-1.1
2,170,856	+		BT1757	0.25	-1.1
2,170,856	+		BT1757	0.25	+0.0
2,170,857	-		BT1757	0.26	-0.7
2,170,861	-		BT1757	0.26	+0.3
2,170,878	+		BT1757	0.28	-2.1
2,170,934	-		BT1757	0.34	-1.2
2,171,104	-		BT1757	0.53	-0.8
2,171,124	+		BT1757	0.56	+0.1
2,171,125	-		BT1757	0.56	-0.1
2,171,178	+		BT1757	0.62	+0.6
2,171,221	-		BT1757	0.67	-0.2
2,171,344	+		BT1757	0.80	-0.0
2,171,500	+				-0.4
2,171,530	+				+1.0
2,171,586	+				-0.1
2,171,632	+				-0.5
2,171,840	+		BT1758	0.25	-0.0
2,171,861	-		BT1758	0.26	+1.6
2,171,861	-		BT1758	0.26	+0.2
2,171,944	+		BT1758	0.34	-1.8
2,172,188	+		BT1758	0.54	-0.8
2,172,188	+		BT1758	0.54	+0.4
2,172,188	+		BT1758	0.54	+0.4
2,172,191	+		BT1758	0.55	-0.8
2,172,191	+		BT1758	0.55	+0.5
2,172,527	-		BT1758	0.83	+0.8
2,172,527	-		BT1758	0.83	+0.0
2,172,569	-		BT1758	0.87	+1.4
2,172,687	-				-0.6
2,172,737	-				+2.4
2,172,746	+				-0.6
2,172,849	+				-1.4
2,172,850	-				+0.3
2,172,915	+				-2.0
2,172,969	+				-0.6
2,173,040	-				-0.4
2,173,070	-				+0.4
2,173,070	-				-1.4
2,173,076	-				-1.6
2,173,076	-				-0.6
2,173,076	-				+0.1
2,173,287	+		BT1759	0.16	-1.2
2,173,299	-		BT1759	0.16	+0.4
2,173,371	-		BT1759	0.20	+0.1
2,173,498	-		BT1759	0.27	+0.4
2,173,656	+		BT1759	0.36	-3.0