Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1468

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
1,807,569	+		BT1467	0.29	+0.1
1,807,614	-		BT1467	0.33	+0.4
1,807,626	+		BT1467	0.33	-0.9
1,807,681	+		BT1467	0.38	-0.3
1,807,812	-		BT1467	0.48	+0.2
1,807,867	+		BT1467	0.53	+0.9
1,807,908	+		BT1467	0.56	-0.1
1,807,909	-		BT1467	0.56	-1.1
1,807,980	+		BT1467	0.62	-0.8
1,807,999	+		BT1467	0.63	-1.7
1,808,000	-		BT1467	0.63	-0.2
1,808,056	+		BT1467	0.68	-0.4
1,808,057	-		BT1467	0.68	-0.4
1,808,092	-		BT1467	0.71	+0.2
1,808,176	+		BT1467	0.78	-0.8
1,808,176	+		BT1467	0.78	+0.9
1,808,177	-		BT1467	0.78	+1.3
1,808,219	+		BT1467	0.81	-1.8
1,808,220	-		BT1467	0.81	+0.6
1,808,230	+		BT1467	0.82	-0.1
1,808,236	+		BT1467	0.82	+1.3
1,808,275	-		BT1467	0.85	-0.0
1,808,302	+		BT1467	0.88	-1.6
1,808,347	+				+0.8
1,808,404	+				-2.8
1,808,449	+				-0.7
1,808,449	+				-0.9
1,808,450	-				-1.7
1,808,541	+				-2.2
1,808,542	-				+0.7
1,808,665	+		BT1468	0.12	+0.3
1,808,765	+		BT1468	0.20	-2.0
1,808,773	+		BT1468	0.21	-0.9
1,808,777	+		BT1468	0.21	+0.8
1,808,778	-		BT1468	0.21	-1.5
1,808,899	-		BT1468	0.31	+0.1
1,808,976	+		BT1468	0.37	+0.7
1,809,013	-		BT1468	0.40	-0.8
1,809,066	-		BT1468	0.44	+2.3
1,809,085	-		BT1468	0.46	+0.9
1,809,139	+		BT1468	0.50	+0.6
1,809,182	+		BT1468	0.54	+0.2
1,809,232	+		BT1468	0.58	+1.3
1,809,242	+		BT1468	0.58	+0.2
1,809,244	+		BT1468	0.59	+0.1
1,809,396	+		BT1468	0.71	-0.7
1,809,485	+		BT1468	0.78	+0.6
1,809,686	+				+0.7
1,809,686	+				-0.1
1,809,688	+				+0.2
1,809,794	+				+0.0
1,809,795	-				-0.8
1,809,832	+				+0.7
1,809,943	-				+1.0
1,810,019	-				+1.0
1,810,030	+				-0.9
1,810,054	+				-0.4
1,810,055	-				+0.3
1,810,164	+				-0.0
1,810,196	+				+0.3
1,810,275	-				-0.3
1,810,730	+		BT1469	0.43	+0.2
1,810,731	-		BT1469	0.43	-2.0