Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1200

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
1,495,437	-				-2.6
1,495,437	-				+1.9
1,495,488	-		BT1199	0.12	+0.5
1,495,571	-		BT1199	0.20	-0.3
1,495,795	+		BT1199	0.44	+0.3
1,495,795	+		BT1199	0.44	+1.1
1,495,798	-		BT1199	0.44	+0.6
1,495,960	+		BT1199	0.61	-1.1
1,495,962	+		BT1199	0.61	+0.2
1,495,982	+		BT1199	0.63	+0.5
1,496,104	+		BT1199	0.76	-0.6
1,496,104	+		BT1199	0.76	+0.6
1,496,107	-		BT1199	0.76	+0.5
1,496,107	-		BT1199	0.76	-1.2
1,496,192	+		BT1199	0.85	-2.8
1,496,193	-		BT1199	0.85	-0.3
1,496,193	-		BT1199	0.85	+0.0
1,496,335	+				-0.7
1,496,391	-				-0.1
1,496,392	+				-0.3
1,496,406	-				+0.0
1,496,406	-				+0.9
1,496,406	-				-1.5
1,496,457	-				-0.3
1,496,472	-				+0.3
1,496,477	-				+1.5
1,496,576	-		BT1200	0.29	-0.1
1,496,614	+		BT1200	0.37	+0.0
1,496,615	-		BT1200	0.37	+0.0
1,496,632	-		BT1200	0.40	+1.5
1,496,668	-		BT1200	0.47	-0.2
1,496,748	+		BT1200	0.64	+1.3
1,496,966	+				+0.0
1,496,970	-				-0.8
1,496,970	-				-0.7
1,497,190	+		BT1201	0.41	-0.4
1,497,193	+		BT1201	0.41	+0.2
1,497,302	-		BT1201	0.59	+0.6
1,497,452	+		BT1201	0.82	+0.7
1,497,565	-				+0.3
1,497,572	-				-0.4