Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1011

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
1,258,643	-		BT1010	0.64	-0.6
1,258,678	-		BT1010	0.65	-0.5
1,258,697	-		BT1010	0.66	+0.2
1,258,700	-		BT1010	0.66	-0.3
1,258,785	+		BT1010	0.70	-2.5
1,258,854	+		BT1010	0.72	+0.2
1,258,855	-		BT1010	0.72	-0.5
1,258,864	-		BT1010	0.73	+1.3
1,258,864	-		BT1010	0.73	+0.7
1,259,081	-		BT1010	0.82	+0.3
1,259,186	-		BT1010	0.86	-0.6
1,259,481	-				+0.3
1,259,727	-		BT1011	0.15	+0.3
1,259,750	+		BT1011	0.17	+0.3
1,259,787	+		BT1011	0.20	-1.7
1,259,790	+		BT1011	0.20	+0.5
1,259,796	+		BT1011	0.20	+0.7
1,259,910	+		BT1011	0.30	+0.5
1,260,009	-		BT1011	0.38	-0.3
1,260,070	+		BT1011	0.43	-0.5
1,260,295	-		BT1011	0.62	-1.1
1,260,295	-		BT1011	0.62	+1.3
1,260,329	-		BT1011	0.65	+1.1
1,260,465	+		BT1011	0.76	-2.0
1,260,468	-		BT1011	0.76	-0.4
1,260,496	-		BT1011	0.79	+0.5
1,260,496	-		BT1011	0.79	+0.8
1,260,583	-		BT1011	0.86	+0.0
1,260,661	-				-0.0
1,260,661	-				-1.0
1,260,762	+				-0.3
1,260,876	+				+0.3
1,261,046	+		BT1012	0.18	-0.1
1,261,074	-		BT1012	0.20	-0.6
1,261,154	-		BT1012	0.25	-0.7
1,261,155	+		BT1012	0.25	+0.5
1,261,212	+		BT1012	0.29	-1.3
1,261,212	+		BT1012	0.29	-0.5
1,261,267	+		BT1012	0.33	-0.8
1,261,320	-		BT1012	0.37	-1.3
1,261,323	-		BT1012	0.37	+0.0
1,261,495	-		BT1012	0.49	-0.8
1,261,602	-		BT1012	0.56	+1.7
1,261,602	-		BT1012	0.56	+0.2
1,261,709	-		BT1012	0.63	-2.1
1,261,723	-		BT1012	0.64	-0.6