Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0877

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
1,077,833	-		BT0876	0.27	-1.4
1,078,028	-		BT0876	0.44	-0.2
1,078,475	+		BT0876	0.84	-0.5
1,078,717	+				+0.3
1,078,723	-				-1.0
1,078,723	-				+0.0
1,078,925	-		BT0877	0.38	+0.1
1,079,028	-		BT0877	0.57	+0.1
1,079,099	-		BT0877	0.70	+0.1
1,079,223	-				-0.1
1,079,223	-				-1.5
1,079,225	+				-1.5
1,079,228	-				+1.8
1,079,318	-				-1.1
1,079,355	-				-0.2
1,079,358	+				+2.3
1,079,443	-		BT0878	0.15	+1.1
1,079,558	+		BT0878	0.33	-1.0
1,079,736	+		BT0878	0.62	+0.7
1,079,976	-				-0.1
1,079,980	-				-1.6
1,080,024	+				-0.8
1,080,026	+				-1.4
1,080,040	+				-0.6
1,080,121	+				+1.3
1,080,160	-				+0.6
1,080,171	-				-1.1
1,080,188	-				-3.8
1,080,199	+		BT0879	0.10	+1.2
1,080,217	+		BT0879	0.13	-0.8
1,080,218	-		BT0879	0.13	+3.7
1,080,256	+		BT0879	0.19	-0.3