Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0184

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
193,351	-		BT0183	0.43	-0.2
193,351	-		BT0183	0.43	-1.0
193,545	+		BT0183	0.57	-0.7
193,602	+		BT0183	0.61	+0.5
193,608	+		BT0183	0.62	-0.1
193,609	-		BT0183	0.62	-1.3
193,656	-		BT0183	0.65	+0.1
193,659	-		BT0183	0.65	-1.8
193,676	+		BT0183	0.67	+1.3
193,676	+		BT0183	0.67	-0.1
193,677	-		BT0183	0.67	+2.1
193,678	+		BT0183	0.67	+0.5
193,678	+		BT0183	0.67	-0.3
193,679	-		BT0183	0.67	+0.5
193,680	+		BT0183	0.67	-1.0
193,681	-		BT0183	0.67	-0.3
193,681	-		BT0183	0.67	+0.6
193,681	-		BT0183	0.67	+0.3
193,719	+		BT0183	0.70	-0.3
193,762	+		BT0183	0.73	-0.3
193,830	+		BT0183	0.78	-0.7
193,831	-		BT0183	0.78	+0.3
193,980	+		BT0183	0.88	-1.1
193,986	+		BT0183	0.89	-2.6
193,986	+		BT0183	0.89	-0.7
193,987	-		BT0183	0.89	-0.3
193,988	+		BT0183	0.89	+0.0
193,989	-		BT0183	0.89	-0.6
193,989	-		BT0183	0.89	-0.3
194,087	-				-0.8
194,102	-				+0.0
194,103	+				-1.0
194,189	-				+0.9
194,418	-		BT0184	0.42	-0.7
194,451	-		BT0184	0.48	+0.3
194,451	-		BT0184	0.48	+1.0
194,524	+		BT0184	0.59	-0.4
194,648	+				+0.9
194,680	-		BT0184	0.85	+1.8
194,683	-		BT0184	0.85	-0.3
194,686	-		BT0184	0.86	-0.7
194,766	+				+1.3
194,820	+				-1.3
194,845	+				+0.7
194,874	+				-0.7
194,899	+				+0.3
195,089	+		BT0185	0.71	+0.6
195,130	+		BT0185	0.85	-0.7