Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0119

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.125 mg/mL; pH 6
108,919	-		BT0117	0.49	+0.8
109,023	-		BT0117	0.81	+0.3
109,294	+		BT0118	0.25	-1.3
109,295	-		BT0118	0.25	-0.9
109,343	+		BT0118	0.32	+0.7
109,343	+		BT0118	0.32	-1.6
109,395	+		BT0118	0.39	-0.3
109,408	-		BT0118	0.41	-1.0
109,412	+		BT0118	0.41	-0.8
109,412	+		BT0118	0.41	-0.0
109,413	-		BT0118	0.42	-0.6
109,511	+		BT0118	0.55	-1.9
109,577	+		BT0118	0.65	-0.3
109,633	-		BT0118	0.73	-0.7
109,650	-		BT0118	0.75	+0.1
109,668	-		BT0118	0.78	-0.1
109,703	+		BT0118	0.82	+1.0
109,720	-		BT0118	0.85	-1.0
109,728	-		BT0118	0.86	-0.0
109,779	-				-0.6
109,830	-				-0.3
109,926	+		BT0119	0.22	-1.4
109,930	+		BT0119	0.23	+0.8
109,980	+		BT0119	0.34	+0.7
109,992	+		BT0119	0.37	+0.3
110,107	+		BT0119	0.63	+1.0
110,150	-		BT0119	0.73	+0.8
110,255	+				+0.8
110,287	+				-0.3
110,499	-				-0.7
110,610	+				-1.7
110,617	-				-1.0
110,617	-				+0.2
110,623	-		BT0121	0.11	+0.1
110,780	-		BT0121	0.69	-1.3
110,825	-		BT0121	0.86	-0.9
110,825	-		BT0121	0.86	-1.0
110,862	+				-0.0
110,868	+				-1.6
110,904	-				+0.5
110,923	+				-0.1
110,923	+				-0.9
110,924	-				-0.6
111,001	+				-0.0
111,036	+				-0.2
111,038	+				-0.4
111,039	-				+0.8
111,039	-				+0.4
111,043	-				+0.1
111,043	-				-0.8
111,045	-				-1.7
111,047	-				-0.5
111,069	-				-0.3