Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003292

Experiment: RCH2_defined_glucose_5mM with Abietic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Abietic Acid 5 mM
3,709,306	+				-0.2
3,709,306	+				-2.0
3,709,307	-				+0.0
3,709,307	-				-1.0
3,709,307	-				-0.4
3,709,307	-				-0.5
3,709,307	-				-1.1
3,709,308	+				+0.2
3,709,308	+				-1.1
3,709,309	-				-0.1
3,709,379	+				-0.6
3,709,852	+				+0.8
3,709,852	+				-1.7
3,709,852	+				-0.5
3,709,852	+				-1.2
3,709,859	+				-0.3
3,709,859	+				-0.4
3,709,859	+				-1.1
3,709,859	+				+0.8
3,709,859	+				-0.2
3,709,925	+		ABIE53_003291	0.36	+0.3
3,709,925	+		ABIE53_003291	0.36	-1.2
3,709,925	+		ABIE53_003291	0.36	+0.7
3,709,925	+		ABIE53_003291	0.36	+0.4
3,709,925	+		ABIE53_003291	0.36	-0.1
3,709,926	-		ABIE53_003291	0.36	+0.7
3,709,926	-		ABIE53_003291	0.36	+0.1
3,709,933	+		ABIE53_003291	0.40	-0.4
3,709,933	+		ABIE53_003291	0.40	+0.6
3,709,996	+		ABIE53_003291	0.78	-0.6
3,709,996	+		ABIE53_003291	0.78	-0.0
3,710,009	+		ABIE53_003291	0.86	-1.4
3,710,009	+		ABIE53_003291	0.86	-0.4
3,710,009	+		ABIE53_003291	0.86	-2.0
3,710,010	-		ABIE53_003291	0.86	+0.1
3,710,030	+				+1.7
3,710,030	+				+1.5
3,710,030	+				-1.2
3,710,030	+				+0.3
3,710,030	+				-0.9
3,710,030	+				+2.3
3,710,030	+				-1.0
3,710,030	+				-0.6
3,710,031	-				+2.3
3,710,031	-				+0.6
3,710,031	-				+2.2
3,710,031	-				+2.5
3,710,159	+				-1.7
3,710,159	+				-0.2
3,710,159	+				+1.9
3,710,159	+				-0.2
3,710,159	+				-0.1
3,710,159	+				+1.7
3,710,159	+				-0.4
3,710,159	+				-1.8
3,710,159	+				-1.7
3,710,159	+				-0.1
3,710,160	-				-0.7
3,710,160	-				+0.3
3,710,160	-				-0.3
3,710,160	-				-0.9
3,710,172	+				-1.6
3,710,172	+				-0.1
3,710,172	+				-0.9
3,710,199	+				-1.2
3,710,214	+				-1.2
3,710,214	+				-1.4
3,710,214	+				-0.4
3,710,214	+				-1.4
3,710,214	+				-0.0
3,710,633	+		ABIE53_003292	0.23	+0.8
3,710,633	+		ABIE53_003292	0.23	+1.0
3,710,633	+		ABIE53_003292	0.23	-0.1
3,710,634	-		ABIE53_003292	0.23	-0.2
3,710,634	-		ABIE53_003292	0.23	-0.4
3,710,634	-		ABIE53_003292	0.23	+1.7
3,710,634	-		ABIE53_003292	0.23	+0.9
3,710,634	-		ABIE53_003292	0.23	+0.8
3,710,790	+		ABIE53_003292	0.32	+0.6
3,710,790	+		ABIE53_003292	0.32	+0.6
3,710,790	+		ABIE53_003292	0.32	-2.6
3,710,790	+		ABIE53_003292	0.32	+0.0
3,710,791	-		ABIE53_003292	0.33	-0.7
3,710,874	+		ABIE53_003292	0.38	+0.1
3,710,874	+		ABIE53_003292	0.38	+0.9
3,710,874	+		ABIE53_003292	0.38	-2.7
3,710,874	+		ABIE53_003292	0.38	-0.5
3,710,874	+		ABIE53_003292	0.38	-1.8
3,710,875	-		ABIE53_003292	0.38	-0.1
3,710,875	-		ABIE53_003292	0.38	+0.3
3,710,875	-		ABIE53_003292	0.38	-0.1
3,710,875	-		ABIE53_003292	0.38	+0.1
3,710,875	-		ABIE53_003292	0.38	-0.4
3,710,875	-		ABIE53_003292	0.38	+1.5
3,710,880	+		ABIE53_003292	0.38	+1.5
3,710,880	+		ABIE53_003292	0.38	-1.2
3,710,880	+		ABIE53_003292	0.38	+0.3
3,710,880	+		ABIE53_003292	0.38	-1.7
3,710,880	+		ABIE53_003292	0.38	-0.5
3,710,880	+		ABIE53_003292	0.38	-0.7
3,710,880	+		ABIE53_003292	0.38	-2.4
3,710,880	+		ABIE53_003292	0.38	-0.0
3,710,880	+		ABIE53_003292	0.38	+0.1
3,710,880	+		ABIE53_003292	0.38	+1.9
3,710,880	+		ABIE53_003292	0.38	-1.4
3,710,880	+		ABIE53_003292	0.38	+1.1
3,710,881	-		ABIE53_003292	0.38	-0.2
3,710,881	-		ABIE53_003292	0.38	-0.6
3,710,881	-		ABIE53_003292	0.38	-0.7
3,710,881	-		ABIE53_003292	0.38	-1.4
3,710,881	-		ABIE53_003292	0.38	-0.1
3,710,881	-		ABIE53_003292	0.38	+1.4
3,710,881	-		ABIE53_003292	0.38	-0.6
3,710,881	-		ABIE53_003292	0.38	-0.4
3,710,881	-		ABIE53_003292	0.38	-0.4
3,710,997	+		ABIE53_003292	0.45	+1.3
3,711,171	+		ABIE53_003292	0.56	-0.3
3,711,171	+		ABIE53_003292	0.56	-0.7
3,711,171	+		ABIE53_003292	0.56	-0.2
3,711,171	+		ABIE53_003292	0.56	+0.2
3,711,171	+		ABIE53_003292	0.56	-0.2
3,711,172	-		ABIE53_003292	0.56	-1.9
3,711,172	-		ABIE53_003292	0.56	-1.0
3,711,172	-		ABIE53_003292	0.56	+0.6
3,711,172	-		ABIE53_003292	0.56	+0.7
3,711,297	+		ABIE53_003292	0.64	+0.6
3,711,297	+		ABIE53_003292	0.64	-0.7
3,711,298	-		ABIE53_003292	0.64	-1.2
3,711,298	-		ABIE53_003292	0.64	+0.1
3,711,298	-		ABIE53_003292	0.64	+1.9
3,711,298	-		ABIE53_003292	0.64	-0.1
3,711,298	-		ABIE53_003292	0.64	+0.1
3,711,298	-		ABIE53_003292	0.64	-0.3
3,711,299	+		ABIE53_003292	0.64	-0.1
3,711,299	+		ABIE53_003292	0.64	+0.0
3,711,299	+		ABIE53_003292	0.64	-0.4
3,711,299	+		ABIE53_003292	0.64	+1.4
3,711,299	+		ABIE53_003292	0.64	+0.9
3,711,299	+		ABIE53_003292	0.64	+0.3
3,711,299	+		ABIE53_003292	0.64	-0.4
3,711,299	+		ABIE53_003292	0.64	-0.8
3,711,299	+		ABIE53_003292	0.64	-1.1
3,711,299	+		ABIE53_003292	0.64	-0.2
3,711,299	+		ABIE53_003292	0.64	-0.2
3,711,299	+		ABIE53_003292	0.64	+0.2
3,711,299	+		ABIE53_003292	0.64	-0.1
3,711,299	+		ABIE53_003292	0.64	+1.2
3,711,299	+		ABIE53_003292	0.64	-0.2
3,711,299	+		ABIE53_003292	0.64	-0.0
3,711,299	+		ABIE53_003292	0.64	+0.7
3,711,300	-		ABIE53_003292	0.64	-0.5
3,711,300	-		ABIE53_003292	0.64	+0.1
3,711,300	-		ABIE53_003292	0.64	+0.9
3,711,300	-		ABIE53_003292	0.64	+0.4
3,711,300	-		ABIE53_003292	0.64	+0.3
3,711,300	-		ABIE53_003292	0.64	+1.0
3,711,300	-		ABIE53_003292	0.64	-0.3
3,711,300	-		ABIE53_003292	0.64	-1.1
3,711,300	-		ABIE53_003292	0.64	-1.7
3,711,300	-		ABIE53_003292	0.64	+0.1
3,711,300	-		ABIE53_003292	0.64	+0.6
3,711,300	-		ABIE53_003292	0.64	-0.1
3,711,300	-		ABIE53_003292	0.64	-1.2
3,711,300	-		ABIE53_003292	0.64	-0.5
3,711,300	-		ABIE53_003292	0.64	-1.5
3,711,300	-		ABIE53_003292	0.64	-1.3
3,711,300	-		ABIE53_003292	0.64	+0.6
3,711,300	-		ABIE53_003292	0.64	-1.7
3,711,354	+		ABIE53_003292	0.68	-0.8
3,711,354	+		ABIE53_003292	0.68	-0.4
3,711,354	+		ABIE53_003292	0.68	+1.2
3,711,354	+		ABIE53_003292	0.68	+1.3
3,711,354	+		ABIE53_003292	0.68	+1.9
3,711,355	-		ABIE53_003292	0.68	+1.9
3,711,355	-		ABIE53_003292	0.68	+0.8
3,711,355	-		ABIE53_003292	0.68	-0.1
3,711,355	-		ABIE53_003292	0.68	-1.5
3,711,355	-		ABIE53_003292	0.68	+0.2
3,711,355	-		ABIE53_003292	0.68	+0.2
3,711,355	-		ABIE53_003292	0.68	+0.3
3,711,355	-		ABIE53_003292	0.68	+0.9
3,711,476	+		ABIE53_003292	0.75	-1.7
3,711,476	+		ABIE53_003292	0.75	-1.1
3,711,477	-		ABIE53_003292	0.75	-1.0
3,711,591	+		ABIE53_003292	0.83	-1.5
3,711,591	+		ABIE53_003292	0.83	+0.6
3,711,591	+		ABIE53_003292	0.83	-0.7
3,711,591	+		ABIE53_003292	0.83	+2.5
3,711,591	+		ABIE53_003292	0.83	-0.7
3,711,591	+		ABIE53_003292	0.83	-1.2
3,711,591	+		ABIE53_003292	0.83	+0.6
3,711,592	-		ABIE53_003292	0.83	-1.8
3,711,592	-		ABIE53_003292	0.83	+1.6
3,711,592	-		ABIE53_003292	0.83	-0.5
3,711,592	-		ABIE53_003292	0.83	-0.1
3,711,592	-		ABIE53_003292	0.83	-1.0
3,711,592	-		ABIE53_003292	0.83	-1.8
3,711,592	-		ABIE53_003292	0.83	+0.9
3,711,672	+		ABIE53_003292	0.88	-0.9
3,711,672	+		ABIE53_003292	0.88	+1.9
3,711,672	+		ABIE53_003292	0.88	-0.3
3,711,672	+		ABIE53_003292	0.88	+0.1
3,711,672	+		ABIE53_003292	0.88	+0.3
3,711,673	-		ABIE53_003292	0.88	-1.1
3,711,673	-		ABIE53_003292	0.88	-0.4
3,711,673	-		ABIE53_003292	0.88	-1.5
3,711,673	-		ABIE53_003292	0.88	-0.1
3,711,673	-		ABIE53_003292	0.88	-2.0
3,711,675	+		ABIE53_003292	0.88	+0.9
3,711,675	+		ABIE53_003292	0.88	-1.2
3,711,675	+		ABIE53_003292	0.88	+0.7
3,711,675	+		ABIE53_003292	0.88	+0.7
3,711,675	+		ABIE53_003292	0.88	+0.3
3,711,676	-		ABIE53_003292	0.88	-0.8
3,711,676	-		ABIE53_003292	0.88	-1.9
3,711,739	+				-1.1
3,711,740	-				-1.3
3,711,846	+				-0.7
3,711,847	-				+1.1
3,711,847	-				+0.2
3,711,847	-				+0.3
3,711,847	-				+2.1
3,711,847	-				-1.0
3,711,847	-				-2.0
3,711,934	-				+0.8
3,711,934	-				-3.3
3,712,306	+		ABIE53_003293	0.38	-0.2
3,712,307	-		ABIE53_003293	0.38	-0.7
3,712,307	-		ABIE53_003293	0.38	-1.0
3,712,307	-		ABIE53_003293	0.38	-0.7
3,712,307	-		ABIE53_003293	0.38	-0.7
3,712,307	-		ABIE53_003293	0.38	+1.9
3,712,351	+		ABIE53_003293	0.43	-2.3
3,712,412	+		ABIE53_003293	0.50	+1.9
3,712,412	+		ABIE53_003293	0.50	-1.6
3,712,413	-		ABIE53_003293	0.50	-0.8
3,712,413	-		ABIE53_003293	0.50	-2.5
3,712,432	+		ABIE53_003293	0.52	-1.1
3,712,432	+		ABIE53_003293	0.52	+0.4
3,712,433	-		ABIE53_003293	0.52	-1.7
3,712,433	-		ABIE53_003293	0.52	+2.2
3,712,783	+		ABIE53_003293	0.89	+0.6
3,712,784	-		ABIE53_003293	0.90	-0.7
3,712,832	+				-1.4
3,712,833	-				-1.9
3,712,833	-				-0.1
3,712,833	-				+0.3
3,712,833	-				-1.5
3,712,834	+				-0.5
3,712,834	+				-1.9
3,712,835	-				-0.7
3,712,835	-				-0.9