Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001310

Experiment: RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM
1,463,244	-		ABIE53_001309	0.56	+1.0
1,463,244	-		ABIE53_001309	0.56	-0.7
1,463,704	+				-0.3
1,463,704	+				-0.2
1,463,704	+				+2.4
1,463,704	+				+0.9
1,463,704	+				+1.6
1,463,705	-				-0.2
1,463,705	-				-0.4
1,463,705	-				-0.0
1,463,705	-				-0.1
1,463,705	-				-0.6
1,463,705	-				+0.3
1,463,710	+				+1.6
1,463,710	+				+0.5
1,463,710	+				+1.2
1,463,710	+				-0.4
1,463,710	+				+0.6
1,463,710	+				+0.8
1,463,710	+				-1.4
1,463,711	-				+0.2
1,463,711	-				-0.9
1,463,711	-				-2.1
1,463,711	-				+2.0
1,463,711	-				-0.0
1,463,711	-				-0.7
1,463,711	-				+1.9
1,463,711	-				+0.3
1,463,711	-				-1.1
1,463,719	+				-1.0
1,463,719	+				-0.3
1,463,954	+				-0.3
1,463,954	+				-1.4
1,463,954	+				+0.8
1,463,955	-				-0.3
1,463,955	-				-0.8
1,463,955	-				+1.4
1,463,955	-				+1.0
1,463,955	-				-0.3
1,464,065	+				+0.6
1,464,065	+				+0.6
1,464,066	-				+0.1
1,464,066	-				-0.5
1,464,066	-				-0.1
1,464,133	+				-2.4
1,464,133	+				-0.1
1,464,385	+		ABIE53_001310	0.36	-0.1
1,464,385	+		ABIE53_001310	0.36	-0.9
1,464,385	+		ABIE53_001310	0.36	+0.8
1,464,386	-		ABIE53_001310	0.37	+0.3
1,464,386	-		ABIE53_001310	0.37	-0.0
1,464,481	+		ABIE53_001310	0.54	-0.1
1,464,481	+		ABIE53_001310	0.54	-1.6
1,464,481	+		ABIE53_001310	0.54	-0.2
1,464,481	+		ABIE53_001310	0.54	+0.8
1,464,481	+		ABIE53_001310	0.54	-0.7
1,464,482	-		ABIE53_001310	0.55	-0.2
1,464,482	-		ABIE53_001310	0.55	+1.2
1,464,482	-		ABIE53_001310	0.55	+0.6
1,464,482	-		ABIE53_001310	0.55	-2.1
1,464,482	-		ABIE53_001310	0.55	-0.0
1,464,482	-		ABIE53_001310	0.55	+1.0
1,464,482	-		ABIE53_001310	0.55	-1.5
1,464,482	-		ABIE53_001310	0.55	+0.9
1,464,482	-		ABIE53_001310	0.55	+0.5
1,464,763	+				-1.5
1,464,763	+				+0.7
1,464,764	-				-0.0
1,464,825	-				+0.3
1,464,906	+				-0.4
1,464,907	-				+0.1