Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006357

Experiment: RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM
2,725,575	+		ABIE53_006356	0.45	-0.2
2,725,895	-		ABIE53_006356	0.65	+0.9
2,725,895	-		ABIE53_006356	0.65	-0.8
2,725,953	+		ABIE53_006356	0.69	-1.4
2,726,130	-		ABIE53_006356	0.80	+0.0
2,726,130	-		ABIE53_006356	0.80	+1.7
2,726,135	+		ABIE53_006356	0.80	-1.1
2,726,135	+		ABIE53_006356	0.80	+0.7
2,726,136	-		ABIE53_006356	0.80	-0.6
2,726,167	-		ABIE53_006356	0.82	-1.0
2,726,251	+		ABIE53_006356	0.88	+0.2
2,726,252	-		ABIE53_006356	0.88	-0.1
2,726,329	-				-0.8
2,726,446	+				-0.9
2,726,464	+				+1.0
2,726,491	-				-1.0
2,726,562	+		ABIE53_006357	0.12	+0.4
2,726,562	+		ABIE53_006357	0.12	+0.2
2,726,563	-		ABIE53_006357	0.12	+0.2
2,726,563	-		ABIE53_006357	0.12	+0.7
2,726,566	+		ABIE53_006357	0.12	-0.3
2,726,566	+		ABIE53_006357	0.12	-0.2
2,726,567	-		ABIE53_006357	0.12	+1.1
2,726,567	-		ABIE53_006357	0.12	+1.4
2,726,630	+		ABIE53_006357	0.19	-0.3
2,726,630	+		ABIE53_006357	0.19	+0.7
2,726,903	-		ABIE53_006357	0.46	+1.4
2,727,209	+		ABIE53_006357	0.76	+0.0
2,727,209	+		ABIE53_006357	0.76	-1.4
2,727,449	+				+1.1
2,727,528	+				-1.0
2,727,528	+				-1.6
2,727,528	+				+0.5
2,727,718	-		ABIE53_006358	0.26	+2.7
2,727,739	+		ABIE53_006358	0.28	-0.1
2,727,739	+		ABIE53_006358	0.28	-0.6
2,727,774	+		ABIE53_006358	0.32	-0.1
2,728,021	+		ABIE53_006358	0.57	-2.3
2,728,022	-		ABIE53_006358	0.57	-1.0
2,728,022	-		ABIE53_006358	0.57	-2.3
2,728,179	+		ABIE53_006358	0.73	+1.3
2,728,279	-		ABIE53_006358	0.83	+0.2
2,728,279	-		ABIE53_006358	0.83	+1.7
2,728,314	+		ABIE53_006358	0.87	-1.1
2,728,321	-		ABIE53_006358	0.88	+0.4
2,728,321	-		ABIE53_006358	0.88	-1.3
2,728,416	+				+1.5