Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005236

Experiment: RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with homovanillyl alcohol 5 mM
1,493,655	-		ABIE53_005234	0.76	-2.9
1,493,945	+				-0.3
1,493,945	+				-0.3
1,494,131	-		ABIE53_005235	0.15	-0.9
1,494,307	+		ABIE53_005235	0.46	+0.7
1,494,307	+		ABIE53_005235	0.46	-0.7
1,494,599	-				+0.1
1,494,599	-				+1.7
1,494,610	+				-0.3
1,494,610	+				+1.8
1,494,610	+				-1.3
1,494,610	+				+3.5
1,494,610	+				-0.4
1,494,610	+				+0.3
1,494,611	-				-1.7
1,494,611	-				+0.6
1,494,614	+				-0.4
1,494,614	+				-0.5
1,494,615	-				+0.8
1,494,615	-				-0.7
1,494,615	-				-0.8
1,494,615	-				-0.3
1,494,615	-				+0.0
1,494,960	-		ABIE53_005236	0.68	-1.1
1,495,050	-		ABIE53_005236	0.87	-2.9
1,495,140	+				+1.1
1,495,236	+				+1.4
1,495,431	+		ABIE53_005237	0.13	-3.2
1,495,504	+		ABIE53_005237	0.17	+0.7
1,495,504	+		ABIE53_005237	0.17	+0.8
1,495,504	+		ABIE53_005237	0.17	+0.5
1,495,505	-		ABIE53_005237	0.17	-0.6
1,495,524	-		ABIE53_005237	0.18	-1.5
1,495,603	-		ABIE53_005237	0.22	-0.7
1,495,603	-		ABIE53_005237	0.22	+0.1
1,495,949	+		ABIE53_005237	0.40	-0.0
1,495,950	-		ABIE53_005237	0.40	+0.7
1,496,081	+		ABIE53_005237	0.47	+0.5
1,496,082	-		ABIE53_005237	0.47	+0.5