Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1990

Experiment: Varel_Bryant_medium_Glucose; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose; pH 6
2,499,059	-		BT1989	0.45	-0.7
2,499,085	-		BT1989	0.47	+0.3
2,499,154	-		BT1989	0.53	-0.6
2,499,168	+		BT1989	0.55	-0.8
2,499,168	+		BT1989	0.55	-1.1
2,499,169	-		BT1989	0.55	-0.2
2,499,169	-		BT1989	0.55	+0.2
2,499,169	-		BT1989	0.55	-0.8
2,499,169	-		BT1989	0.55	+1.4
2,499,185	-		BT1989	0.56	-0.2
2,499,198	+		BT1989	0.58	-0.3
2,499,214	-		BT1989	0.59	-0.2
2,499,214	-		BT1989	0.59	+0.1
2,499,278	-		BT1989	0.65	-0.2
2,499,308	-		BT1989	0.68	-1.8
2,499,342	+		BT1989	0.71	+0.2
2,499,343	-		BT1989	0.71	-0.0
2,499,343	-		BT1989	0.71	-0.5
2,499,343	-		BT1989	0.71	-1.6
2,499,346	+		BT1989	0.71	-1.6
2,499,346	+		BT1989	0.71	-0.4
2,499,347	-		BT1989	0.71	+0.2
2,499,347	-		BT1989	0.71	+0.2
2,499,389	-		BT1989	0.75	-1.0
2,499,391	-		BT1989	0.75	-0.6
2,499,471	-		BT1989	0.83	+1.6
2,499,505	+		BT1989	0.86	-1.7
2,499,521	+		BT1989	0.87	-1.7
2,499,525	+		BT1989	0.88	-1.2
2,499,525	+		BT1989	0.88	-0.2
2,499,525	+		BT1989	0.88	-1.9
2,499,526	-		BT1989	0.88	-0.6
2,499,576	+				+0.1
2,499,648	+				+0.6
2,499,663	-				+3.4
2,499,667	+				+0.2
2,499,668	-				-1.9
2,499,668	-				-1.7
2,499,668	-				-1.5
2,499,678	+				-1.4
2,499,679	-				-1.2
2,499,730	-				-1.4
2,499,730	-				-1.8
2,499,922	-				-2.9
2,500,029	-		BT1990	0.14	-1.5
2,500,032	-		BT1990	0.15	-1.5
2,500,120	-		BT1990	0.33	-2.5
2,500,341	-		BT1990	0.79	-0.8
2,500,454	-				-0.3
2,500,605	-		BT1991	0.27	-1.5
2,500,605	-		BT1991	0.27	+1.0
2,500,704	-				+1.0
2,500,785	-		BT1991	0.68	-2.3
2,500,981	-				-1.0
2,501,004	-				-0.4
2,501,074	-				-0.8
2,501,074	-				+0.9
2,501,142	-				-0.4
2,501,165	+				-0.3
2,501,165	+				-1.9
2,501,166	-				-0.5
2,501,168	-				+1.0
2,501,168	-				+0.1
2,501,230	-				-0.0
2,501,234	-				-0.3
2,501,234	-				+0.2
2,501,236	+				-1.1
2,501,265	-				-0.5
2,501,369	-				-0.8
2,501,382	+				-1.0
2,501,383	-				-0.8
2,501,385	-				-1.6
2,501,400	-				-0.4
2,501,436	-				-0.7