Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4066

Experiment: Varel_Bryant_medium_Glucose; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose; pH 6
5,299,300	+		BT4065	0.38	-1.9
5,299,319	+		BT4065	0.40	-0.6
5,299,483	-		BT4065	0.50	-0.0
5,299,490	+		BT4065	0.50	-1.2
5,299,539	+		BT4065	0.53	+0.3
5,299,540	-		BT4065	0.53	-0.6
5,299,614	+		BT4065	0.58	-1.7
5,299,614	+		BT4065	0.58	-2.1
5,299,650	+		BT4065	0.60	-0.0
5,299,715	-		BT4065	0.64	+0.4
5,299,757	+		BT4065	0.67	+1.0
5,299,757	+		BT4065	0.67	-0.9
5,299,857	+		BT4065	0.73	-1.6
5,299,857	+		BT4065	0.73	-0.7
5,299,887	+				-0.5
5,299,887	+		BT4065	0.75	-0.5
5,299,894	-		BT4065	0.75	-1.9
5,299,924	+		BT4065	0.77	-2.5
5,299,928	+		BT4065	0.77	-0.3
5,299,970	+		BT4065	0.80	+0.5
5,299,971	-		BT4065	0.80	-1.6
5,299,973	+		BT4065	0.80	-0.3
5,300,237	-				+1.0
5,300,251	+				+0.4
5,300,272	-				-0.5
5,300,354	+		BT4066	0.10	-0.6
5,300,365	+		BT4066	0.12	-1.4
5,300,386	+		BT4066	0.16	-0.7
5,300,386	+		BT4066	0.16	-0.2
5,300,386	+		BT4066	0.16	-1.7
5,300,420	+		BT4066	0.22	-3.3
5,300,420	+		BT4066	0.22	-1.0
5,300,422	+		BT4066	0.22	-1.4
5,300,424	+		BT4066	0.22	-1.2
5,300,424	+		BT4066	0.22	-1.0
5,300,444	+		BT4066	0.26	-1.2
5,300,444	+		BT4066	0.26	-1.0
5,300,467	+		BT4066	0.29	-1.9
5,300,521	+		BT4066	0.39	-1.5
5,300,545	+		BT4066	0.43	+0.3
5,300,603	+		BT4066	0.52	-1.3
5,300,603	+		BT4066	0.52	-1.3
5,300,714	+		BT4066	0.71	+0.1
5,300,910	+				-1.0
5,300,935	+		BT4067	0.17	-0.8
5,300,950	+		BT4067	0.21	-1.6
5,300,950	+		BT4067	0.21	-0.3
5,300,983	+		BT4067	0.30	-1.4
5,300,983	+		BT4067	0.30	-1.8
5,301,059	+		BT4067	0.52	-1.7
5,301,097	+		BT4067	0.63	-0.8
5,301,243	+				-1.8
5,301,255	+				-1.9
5,301,257	+				+0.2
5,301,273	+				-1.2
5,301,367	+				-1.3
5,301,367	+				-0.9
5,301,367	+				-1.6
5,301,369	+				+0.2
5,301,369	+				-2.0
5,301,374	+				-0.2
5,301,374	+				-0.5
5,301,378	+		BT4068	0.10	+1.1
5,301,389	+		BT4068	0.13	-0.5
5,301,459	-		BT4068	0.31	-1.5
5,301,489	+		BT4068	0.39	-2.0
5,301,489	+		BT4068	0.39	-0.8
5,301,590	-		BT4068	0.66	-1.0
5,301,590	-		BT4068	0.66	-0.0
5,301,593	+		BT4068	0.67	-1.1
5,301,593	+		BT4068	0.67	-1.2
5,301,594	-		BT4068	0.67	-2.7
5,301,728	+				-0.9
5,301,744	-				-0.4
5,301,749	+				-2.0
5,301,750	-				+0.1
5,301,864	+				-0.9
5,301,865	-				+0.8
5,301,877	-				+1.4