Experiment: Varel_Bryant_medium_Glucose; pH 6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0615 and BT0616 are separated by 357 nucleotides BT0616 and BT0617 are separated by 6 nucleotides BT0617 and BT0618 are separated by 24 nucleotides
BT0615: BT0615 - conserved hypothetical protein (NCBI ptt file), at 760,881 to 761,399
BT0615
BT0616: BT0616 - conserved hypothetical protein (NCBI ptt file), at 761,757 to 762,182
BT0616
BT0617: BT0617 - Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file), at 762,189 to 763,070
BT0617
BT0618: BT0618 - Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfC (NCBI ptt file), at 763,095 to 764,432
BT0618
Position (kb) 762
763
764 Strain fitness (log2 ratio) -2
-1
0
1 at 761.220 kb on - strand, within BT0615 at 761.525 kb on - strand at 761.538 kb on + strand at 761.547 kb on + strand at 761.547 kb on + strand at 761.560 kb on - strand at 761.601 kb on + strand at 761.602 kb on - strand at 761.629 kb on - strand at 761.771 kb on + strand at 761.772 kb on - strand at 761.783 kb on - strand at 761.906 kb on + strand, within BT0616 at 761.906 kb on + strand, within BT0616 at 761.939 kb on - strand, within BT0616 at 762.004 kb on + strand, within BT0616 at 762.070 kb on - strand, within BT0616 at 762.116 kb on - strand, within BT0616 at 762.228 kb on - strand at 762.497 kb on - strand, within BT0617 at 762.583 kb on - strand, within BT0617 at 762.708 kb on - strand, within BT0617 at 762.790 kb on - strand, within BT0617 at 763.161 kb on - strand at 763.603 kb on - strand, within BT0618 at 763.654 kb on + strand, within BT0618 at 763.688 kb on - strand, within BT0618
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose; pH 6 remove 761,220 - BT0615 0.65 -1.3 761,525 - -2.2 761,538 + +0.2 761,547 + -1.0 761,547 + -0.2 761,560 - -0.8 761,601 + -0.8 761,602 - +0.5 761,629 - -0.3 761,771 + -1.0 761,772 - -0.3 761,783 - -1.8 761,906 + BT0616 0.35 -0.7 761,906 + BT0616 0.35 +0.3 761,939 - BT0616 0.43 +0.5 762,004 + BT0616 0.58 +0.2 762,070 - BT0616 0.73 +0.8 762,116 - BT0616 0.84 -0.2 762,228 - -0.5 762,497 - BT0617 0.35 +0.5 762,583 - BT0617 0.45 -1.7 762,708 - BT0617 0.59 -1.1 762,790 - BT0617 0.68 -2.6 763,161 - -0.5 763,603 - BT0618 0.38 -0.1 763,654 + BT0618 0.42 -0.1 763,688 - BT0618 0.44 -1.1
Or see this region's nucleotide sequence