Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005487

Experiment: RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM
1,763,341	+				+0.3
1,763,342	-				-1.8
1,763,342	-				-0.1
1,763,342	-				-0.1
1,763,475	+		ABIE53_005486	0.16	-0.1
1,763,519	+		ABIE53_005486	0.21	+0.5
1,763,558	+		ABIE53_005486	0.25	+0.2
1,763,559	-		ABIE53_005486	0.25	-1.5
1,763,559	-		ABIE53_005486	0.25	-0.5
1,763,563	+		ABIE53_005486	0.26	+0.5
1,763,563	+		ABIE53_005486	0.26	-0.5
1,763,563	+		ABIE53_005486	0.26	-2.1
1,763,564	-		ABIE53_005486	0.26	-1.0
1,763,569	+		ABIE53_005486	0.27	-0.5
1,763,569	+		ABIE53_005486	0.27	+0.5
1,763,569	+		ABIE53_005486	0.27	-1.0
1,763,569	+		ABIE53_005486	0.27	+0.1
1,763,570	-		ABIE53_005486	0.27	+0.9
1,763,570	-		ABIE53_005486	0.27	-0.9
1,763,570	-		ABIE53_005486	0.27	+1.5
1,763,844	-		ABIE53_005486	0.59	-0.3
1,763,850	+		ABIE53_005486	0.59	+0.5
1,764,045	+		ABIE53_005486	0.82	-1.1
1,764,046	-		ABIE53_005486	0.82	+0.3
1,764,046	-		ABIE53_005486	0.82	+0.1
1,764,046	-		ABIE53_005486	0.82	+0.4
1,764,249	+				+0.2
1,764,249	+				+1.1
1,764,250	-				-0.2
1,764,270	+				-0.8
1,764,271	-				-0.5
1,764,487	-		ABIE53_005487	0.29	+2.7
1,764,706	-		ABIE53_005487	0.50	+0.1
1,764,826	-		ABIE53_005487	0.62	+1.5
1,765,054	+		ABIE53_005487	0.85	-0.4
1,765,330	+				-1.8
1,765,331	-				-0.1
1,765,450	+		ABIE53_005488	0.14	+1.5
1,765,450	+		ABIE53_005488	0.14	-0.5
1,765,450	+		ABIE53_005488	0.14	-1.1
1,765,450	+		ABIE53_005488	0.14	-0.9
1,765,451	-		ABIE53_005488	0.14	+1.5
1,765,451	-		ABIE53_005488	0.14	+1.6
1,765,594	+		ABIE53_005488	0.23	-1.4
1,765,714	+		ABIE53_005488	0.30	+0.5
1,765,825	+		ABIE53_005488	0.36	+0.3
1,765,825	+		ABIE53_005488	0.36	-0.4
1,765,825	+		ABIE53_005488	0.36	+0.9
1,765,825	+		ABIE53_005488	0.36	+0.5
1,765,826	-		ABIE53_005488	0.36	+0.5
1,765,826	-		ABIE53_005488	0.36	+0.5
1,765,826	-		ABIE53_005488	0.36	+1.0
1,765,826	-		ABIE53_005488	0.36	-0.9
1,765,826	-		ABIE53_005488	0.36	-0.7
1,765,826	-		ABIE53_005488	0.36	-2.1
1,766,064	+		ABIE53_005488	0.50	+1.3
1,766,065	-		ABIE53_005488	0.50	+0.5
1,766,065	-		ABIE53_005488	0.50	-0.2
1,766,065	-		ABIE53_005488	0.50	-0.1
1,766,065	-		ABIE53_005488	0.50	+0.2
1,766,071	+		ABIE53_005488	0.51	-1.8
1,766,071	+		ABIE53_005488	0.51	-0.5
1,766,072	-		ABIE53_005488	0.51	-1.5
1,766,072	-		ABIE53_005488	0.51	-0.2
1,766,072	-		ABIE53_005488	0.51	+0.2
1,766,072	-		ABIE53_005488	0.51	-0.1
1,766,072	-		ABIE53_005488	0.51	-0.5
1,766,072	-		ABIE53_005488	0.51	-0.7
1,766,075	+		ABIE53_005488	0.51	+0.9
1,766,075	+		ABIE53_005488	0.51	-0.1
1,766,075	+		ABIE53_005488	0.51	-0.1
1,766,075	+		ABIE53_005488	0.51	-1.8
1,766,076	-		ABIE53_005488	0.51	+0.5
1,766,076	-		ABIE53_005488	0.51	-0.6
1,766,076	-		ABIE53_005488	0.51	-0.5
1,766,076	-		ABIE53_005488	0.51	-1.5
1,766,076	-		ABIE53_005488	0.51	+0.7
1,766,087	+		ABIE53_005488	0.52	+0.0